RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 CNGA2Q16280 664 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 CCDC80Q76M96 950 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 HOMEZQ8IX15 550 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 CKAP2Q8WWK9 683 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 NDNQ99608 321 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 ILKAPQ9H0C8 392 aaPredicted RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 SCN3BQ9NY72 215 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 MROH7Q68CQ1 1323 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 USP1O94782 785 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 ANO4Q32M45 955 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 CCDC81Q6ZN84 652 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 TMEM179Q6ZVK1 233 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 MARK2Q7KZI7 788 aaKnown RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 IQCKQ8N0W5 287 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 TUFT1Q9NNX1 390 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 EXOSC4Q9NPD3 245 aaKnown RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 AGO2Q9UKV8 859 aaKnown RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 V9GYQ6 96 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 CEP152O94986 1710 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 RFX5P48382 616 aaPredicted RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 FAM160B2Q86V87 743 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 TERB1Q8NA31 727 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 DDX50Q9BQ39 737 aaKnown RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 HADHAP40939 763 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 NTRK3Q16288 839 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 AASDHQ4L235 1098 aaPredicted RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 MAGEC3Q8TD91 643 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 PSPC1Q8WXF1 523 aaKnown RBP16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 ULK4Q96C45 1275 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 GRIP2Q9C0E4 1043 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 KIAA1683Q9H0B3 1180 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 FLT1P17948 1338 aa16.22■□□□□ 0.19
SPOCK1-202ENST00000394945 SNRNP35Q16560 246 aaKnown RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 COBLL1Q53SF7 1204 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 FRA10AC1Q70Z53 315 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 CAB39Q9Y376 341 aaPredicted RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 ADGRB3O60242 1522 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 LRRIQ1Q96JM4 1722 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 BCL10O95999 233 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 TFE3P19532 575 aaPredicted RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 GRB10Q13322 594 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 MAPK6Q16659 721 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 SPDYCQ5MJ68 293 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 ISLR2Q6UXK2 745 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 RNF217Q8TC41 542 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 RMND5BQ96G75 393 aaPredicted RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 OXNAD1Q96HP4 312 aaPredicted RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 MAGEB5Q9BZ81 275 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 LIN7AO14910 233 aaPredicted RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 SLC45A4Q5BKX6 768 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 SULF1Q8IWU6 871 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 SEPT8Q92599 483 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 ZNF75CPQ92670 426 aaPredicted RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 VPS50Q96JG6 964 aa16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 FRMD8Q9BZ67 464 aaPredicted RBP16.21■□□□□ 0.19
SPOCK1-202ENST00000394945 KPNA4O00629 521 aaPredicted RBP16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 PDGFRAP16234 1089 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 SMTNL2Q2TAL5 461 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 PCNX4Q63HM2 1172 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 TSHZ1Q6ZSZ6 1077 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 CROCCP3Q8IVE0 287 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 CCDC60Q8IWA6 550 aaPredicted RBP16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 FEZF2Q8TBJ5 459 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 GCNAQ96QF7 691 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 COQ7Q99807 217 aa16.21■□□□□ 0.18
SPOCK1-202ENST00000394945 NRKQ7Z2Y5 1582 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 RAG1P15918 1043 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 BMP6P22004 513 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 PSMA4P25789 261 aaKnown RBP16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 QPCTQ16769 361 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 ACAD10Q6JQN1 1059 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 TCP10LQ8TDR4 215 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 ATAD3AQ9NVI7 634 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 CLRN2A0PK11 232 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 P4HA2O15460 535 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 PGM3O95394 542 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 GH2P01242 217 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 RIPK1Q13546 671 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 DEPDC1Q5TB30 811 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 EZH1Q92800 747 aaPredicted RBP16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 BBS2Q9BXC9 721 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 TMEM165Q9HC07 324 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 SMNDC1O75940 238 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 KRT36O76013 467 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 NCALDP61601 193 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 KRT76Q01546 638 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 TNFAIP1Q13829 316 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 INAQ16352 499 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 UGP2Q16851 508 aa16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 TCHHL1Q5QJ38 904 aaPredicted RBP16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 CWF19L1Q69YN2 538 aaKnown RBP16.2■□□□□ 0.18
SPOCK1-202ENST00000394945 ZCCHC7Q8N3Z6 543 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms