RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 BDH2Q9BUT1 245 aa3.78□□□□□ -1.8
PTPRC-205ENST00000391970 STK31Q9BXU1 1019 aa3.78□□□□□ -1.8
PTPRC-205ENST00000391970 MS4A7Q9GZW8 240 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-205ENST00000391970 GJB4Q9NTQ9 266 aa3.78□□□□□ -1.8
PTPRC-205ENST00000391970 CTTNBP2NLQ9P2B4 639 aa3.78□□□□□ -1.8
PTPRC-205ENST00000391970 EIF2B4Q9UI10 523 aaKnown RBP3.78□□□□□ -1.8
PTPRC-205ENST00000391970 ATP11BQ9Y2G3 1177 aa3.78□□□□□ -1.8
PTPRC-205ENST00000391970 AATKQ6ZMQ8 1374 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 A0A087WV62 115 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 CCDC195A0A1B0GUA6 201 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 AHRRA9YTQ3 701 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 RPS6KA4O75676 772 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 FOSP01100 380 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ELANEP08246 267 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 SPATA31D3P0C874 917 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 CYP2C9P11712 490 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 XRCC6P12956 609 aaKnown RBP eCLIP3.77□□□□□ -1.81
PTPRC-205ENST00000391970 KCNA2P16389 499 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ACRV1P26436 265 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 EEF1GP26641 437 aaKnown RBP3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TECP42680 631 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 HSD11B2P80365 405 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 OCA2Q04671 838 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TAF2Q6P1X5 1199 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ZDHHC24Q6UX98 284 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 CATSPERGQ6ZRH7 1159 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 LRRC55Q6ZSA7 311 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 SPATA31D4Q6ZUB0 917 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 RNF44Q7L0R7 432 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TMPRSS9Q7Z410 1059 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 GDF7Q7Z4P5 450 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 GAS2L3Q86XJ1 694 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 MAPKAPK5Q8IW41 473 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 SDR16C5Q8N3Y7 309 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TTC9BQ8N6N2 239 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 Q8NA96 180 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 NSUN7Q8NE18 718 aaKnown RBP3.77□□□□□ -1.81
PTPRC-205ENST00000391970 POC1BQ8TC44 478 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ZNF483Q8TF39 744 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-205ENST00000391970 IPCEF1Q8WWN9 437 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-205ENST00000391970 RAPGEF4Q8WZA2 1011 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TMEM41AQ96HV5 264 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 SLC46A1Q96NT5 459 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 MOGAT1Q96PD6 335 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 HEPHQ9BQS7 1158 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ZSWIM1Q9BR11 485 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 MESP1Q9BRJ9 268 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TTLL2Q9BWV7 592 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TEX101Q9BY14 249 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TTYH3Q9C0H2 523 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TRPM5Q9NZQ8 1165 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ZNF212Q9UDV6 495 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 MID2Q9UJV3 735 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ITGB1BP2Q9UKP3 347 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 SORCS3Q9UPU3 1222 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-205ENST00000391970 TCAF1Q9Y4C2 921 aa3.77□□□□□ -1.81
PTPRC-205ENST00000391970 MARCH11A6NNE9 402 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 E7ENX8 843 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 AREL1O15033 823 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 ADAMTS3O15072 1205 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 PLA2G6O60733 806 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 RASSF9O75901 435 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 RECQL4O94761 1208 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 SUN1O94901 812 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 SCAF4O95104 1147 aaKnown RBP3.76□□□□□ -1.81
PTPRC-205ENST00000391970 GPANK1O95872 356 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 A1BGP04217 495 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 ATXN1LP0C7T5 689 aaKnown RBP3.76□□□□□ -1.81
PTPRC-205ENST00000391970 MYL4P12829 197 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 CHRM3P20309 590 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 ACVR2AP27037 513 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 IL1R2P27930 398 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 ZNF134P52741 427 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 MC2RQ01718 297 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 TAP2Q03519 686 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 TOB2Q14106 344 aaPredicted RBP3.76□□□□□ -1.81
PTPRC-205ENST00000391970 NFIXQ14938 502 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 IQCB1Q15051 598 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 TUBB8Q3ZCM7 444 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 ZNF585AQ6P3V2 769 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.76□□□□□ -1.81
PTPRC-205ENST00000391970 SLC30A10Q6XR72 485 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 TTLL10Q6ZVT0 673 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 YAF2Q8IY57 180 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 SYTL1Q8IYJ3 562 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 TXLNBQ8N3L3 684 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 VGLL2Q8N8G2 317 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 CPT1CQ8TCG5 803 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 ZNF566Q969W8 418 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 LOXL4Q96JB6 756 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 PPP1R9BQ96SB3 815 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 GDF15Q99988 308 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 EIF2AQ9BY44 585 aaKnown RBP3.76□□□□□ -1.81
PTPRC-205ENST00000391970 STK33Q9BYT3 514 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 SMOC2Q9H3U7 446 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 DEF6Q9H4E7 631 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 PPCSQ9HAB8 311 aa3.76□□□□□ -1.81
PTPRC-205ENST00000391970 XPNPEP3Q9NQH7 507 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms