RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 FAM107AO95990 144 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 AGTP01019 485 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SSTR1P30872 391 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 MARCKSL1P49006 195 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 AP2B1P63010 937 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ERVK-9P63128 1117 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 LY6KQ17RY6 165 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ATP13A4Q4VNC1 1196 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 OLFML2BQ68BL8 750 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ZCCHC23Q6ZST2 131 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 FEZF2Q8TBJ5 459 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ULK4Q96C45 1275 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 TLR10Q9BXR5 811 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 GLIS2Q9BZE0 524 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 ADNPQ9H2P0 1102 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 NOD2Q9HC29 1040 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SUN2Q9UH99 717 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ESRRBO95718 433 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SHBGP04278 402 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 TMEM253P0C7T8 217 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 MCF2P10911 925 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 TPH1P17752 444 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CORO7P57737 925 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 HIC1Q14526 733 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 STAT4Q14765 748 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 EDRF1Q3B7T1 1238 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CYB5D1Q6P9G0 228 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 COL23A1Q86Y22 540 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 MMGT1Q8N4V1 131 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 EFCAB3Q8N7B9 438 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 FBXO36Q8NEA4 188 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ZSWIM1Q9BR11 485 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ATXN3LQ9H3M9 355 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 TMEM8AQ9HCN3 771 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 TRAF3IP3Q9Y228 551 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PCDHB2Q9Y5E7 798 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PFDN6O15212 129 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ZSCAN9O15535 394 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 OTUD4Q01804 1114 aaKnown RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 RCN1Q15293 331 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CNGA3Q16281 694 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 MTDHQ86UE4 582 aaKnown RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 RCOR2Q8IZ40 523 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SNX19Q92543 992 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 USP6NLQ92738 828 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SEPT5Q99719 369 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 RERGLQ9H628 205 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PLEKHA5Q9HAU0 1116 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CASS4Q9NQ75 786 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ACSS2Q9NR19 701 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 NYAP2Q9P242 653 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ORC6Q9Y5N6 252 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 IQGAP1P46940 1657 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 USP12O75317 370 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ACAT1P24752 427 aaKnown RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 INPP1P49441 399 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CRADDP78560 199 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PWP1Q13610 501 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CENPPQ6IPU0 288 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 POU5F2Q8N7G0 328 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SNRNP27Q8WVK2 155 aaKnown RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 CYGBQ8WWM9 190 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ZNF512BQ96KM6 892 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 MTA3Q9BTC8 594 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ZBED2Q9BTP6 218 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 FGFBP2Q9BYJ0 223 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 GCOM2Q9BZD3 368 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 KCTD10Q9H3F6 313 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CXorf56Q9H5V9 222 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PSMC3IPQ9P2W1 217 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 STAP1Q9ULZ2 295 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PHTF1Q9UMS5 762 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 EME2A4GXA9 379 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 SYCE1LA8MT33 242 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SLC16A3O15427 465 aaKnown RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 AKAP10O43572 662 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 LGR5O75473 907 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PYGBP11216 843 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ITIH2P19823 946 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 TAC1P20366 129 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 KCNA3P22001 575 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SCTRP47872 440 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 TSPY1Q01534 308 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 DEUP1Q05D60 604 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 LRRC23Q53EV4 343 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 SV2AQ7L0J3 742 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 MIB1Q86YT6 1006 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PTPRN2Q92932 1015 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 EMID1Q96A84 441 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 CNBD2Q96M20 576 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CENPKQ9BS16 269 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 MANSC1Q9H8J5 431 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SUFUQ9UMX1 484 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CD163L1Q9NR16 1453 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 PFASO15067 1338 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 MGEA5O60502 916 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SERPIND1P05546 499 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CXCL8P10145 99 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ACO1P21399 889 aaKnown RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 BGNP21810 368 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms