RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-202ENST00000374426 CYB561D2O14569 222 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 SLC30A4O14863 429 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 CDC25CP30307 473 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 HOXA6P31267 233 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 PLCB2Q00722 1185 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 VEPH1Q14D04 833 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 KARSQ15046 597 aaKnown RBP14.91□□□□□ -0.02
CXCL12-202ENST00000374426 RABEP1Q15276 862 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 CSRP2Q16527 193 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 WSCD1Q658N2 575 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 PRR23CQ6ZRP0 262 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-202ENST00000374426 GIPC2Q8TF65 315 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 RAD54LQ92698 747 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 TMX3Q96JJ7 454 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 PYM1Q9BRP8 204 aaKnown RBP14.91□□□□□ -0.02
CXCL12-202ENST00000374426 IKZF4Q9H2S9 585 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 ZHX3Q9H4I2 956 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 STYXL1Q9Y6J8 313 aa14.91□□□□□ -0.02
CXCL12-202ENST00000374426 TBCAO75347 108 aaKnown RBP14.9□□□□□ -0.02
CXCL12-202ENST00000374426 CD2BP2O95400 341 aaKnown RBP14.9□□□□□ -0.02
CXCL12-202ENST00000374426 KRT18P05783 430 aaKnown RBP14.9□□□□□ -0.02
CXCL12-202ENST00000374426 MCM2P49736 904 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 TAF6P49848 677 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 ITPRIPL2Q3MIP1 535 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 PKN3Q6P5Z2 889 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 TMEM150AQ86TG1 271 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 WDR5BQ86VZ2 330 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 METTL23Q86XA0 190 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 EFCAB13Q8IY85 973 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 CMTM8Q8IZV2 173 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 SYNPOQ8N3V7 929 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 CHFRQ96EP1 664 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 GCNAQ96QF7 691 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 CCSER1Q9C0I3 900 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 ST6GALNAC4Q9H4F1 302 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 AGO2Q9UKV8 859 aaKnown RBP14.9□□□□□ -0.02
CXCL12-202ENST00000374426 CFAP47Q6ZTR5 3102 aa14.9□□□□□ -0.02
CXCL12-202ENST00000374426 CHD6Q8TD26 2715 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 OTOL1A6NHN0 477 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 EXTL3O43909 919 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 GDF9O60383 454 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 ADRB1P08588 477 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 HAPLN1P10915 354 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 HMGA1P17096 107 aaKnown RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 ABCD1P33897 745 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 LONP1P36776 959 aaKnown RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 SMARCB1Q12824 385 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 SLFN12LQ6IEE8 588 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 CRELD2Q6UXH1 353 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 THEM5Q8N1Q8 247 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 FAM160A2Q8N612 972 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 SPPL2BQ8TCT7 592 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 C2orf15Q8WU43 125 aaKnown RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 LARP4BQ92615 738 aaKnown RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 FAM83CQ9BQN1 747 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 HPS4Q9NQG7 708 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 GKN1Q9NS71 199 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 THG1LQ9NWX6 298 aaKnown RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 ABI2Q9NYB9 513 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 CCL26Q9Y258 94 aa14.89□□□□□ -0.03
CXCL12-202ENST00000374426 KIF26AQ9ULI4 1882 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-202ENST00000374426 RALGAPA1Q6GYQ0 2036 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 KPNA7A9QM74 516 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 F11P03951 625 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 ADSSP30520 456 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 NLRP12P59046 1061 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 POU5F1Q01860 360 aaKnown RBP14.88□□□□□ -0.03
CXCL12-202ENST00000374426 TAF12Q16514 161 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 TMEM196Q5HYL7 178 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 PPM1JQ5JR12 505 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 CEP68Q76N32 757 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 ZNF720Q7Z2F6 126 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 RASSF8Q8NHQ8 419 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 RIN3Q8TB24 985 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 USP13Q92995 863 aaPredicted RBP14.88□□□□□ -0.03
CXCL12-202ENST00000374426 TMLHEQ9NVH6 421 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 ZMYM5Q9UJ78 669 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 SPAG17Q6Q759 2223 aa14.88□□□□□ -0.03
CXCL12-202ENST00000374426 PPP1R37O75864 691 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 KRT37O76014 449 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 BMP15O95972 392 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 DDIT3P35638 169 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 AVPR1AP37288 418 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 PXNP49023 591 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-202ENST00000374426 GPR15P49685 360 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 WNT7BP56706 349 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 RUNX3Q13761 415 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 TRIM68Q6AZZ1 485 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 FSTL4Q6MZW2 842 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 SFR1Q86XK3 245 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 DCP1BQ8IZD4 617 aaKnown RBP14.87□□□□□ -0.03
CXCL12-202ENST00000374426 MAB21L3Q8N8X9 362 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 STKLD1Q8NE28 680 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 POMGNT1Q8WZA1 660 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 EBF3Q9H4W6 596 aa14.87□□□□□ -0.03
CXCL12-202ENST00000374426 PCDHB5Q9Y5E4 795 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms