RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 HSPBP1Q9NZL4 362 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 WDFY4Q6ZS81 3184 aa20.32■□□□□ 0.84
TMEM53-201ENST00000372235 A0A1W2PRU2 124 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 FAM170BA6NMN3 283 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 DPYSL4O14531 572 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 MOSPD3O75425 235 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 DCNP07585 359 aaKnown RBP20.31■□□□□ 0.84
TMEM53-201ENST00000372235 HAPLN1P10915 354 aaPredicted RBP20.31■□□□□ 0.84
TMEM53-201ENST00000372235 BFSP1Q12934 665 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 UBXN2BQ14CS0 331 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 FNBP1Q96RU3 617 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 TMEM209Q96SK2 561 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 FGFBP2Q9BYJ0 223 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 CRISPLD1Q9H336 500 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 ATXN3LQ9H3M9 355 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 LTB4R2Q9NPC1 389 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 DLGAP2Q9P1A6 1054 aa20.31■□□□□ 0.84
TMEM53-201ENST00000372235 SLFN14P0C7P3 912 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 DDX6P26196 483 aaKnown RBP eCLIP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 RPS9P46781 194 aaKnown RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 RPL10AP62906 217 aaKnown RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 KRT85P78386 507 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 PSMD2Q13200 908 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 MAPRE1Q15691 268 aaKnown RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 TPRG1Q6ZUI0 275 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 PDCL2Q8N4E4 241 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 XXYLT1Q8NBI6 393 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 PLA2G2FQ9BZM2 168 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 FOXQ1Q9C009 403 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 MTMR12Q9C0I1 747 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 AGPAT3Q9NRZ7 376 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 DDX43Q9NXZ2 648 aaKnown RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 UXTQ9UBK9 157 aaPredicted RBP20.3■□□□□ 0.84
TMEM53-201ENST00000372235 SNX9Q9Y5X1 595 aa20.3■□□□□ 0.84
TMEM53-201ENST00000372235 CHADO15335 359 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 KIF20AO95235 890 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 FAM163BP0C2L3 166 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 CSH1P0DML2 217 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 CSH2P0DML3 217 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 GABRR2P28476 465 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 GDI1P31150 447 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 DNM1Q05193 864 aaKnown RBP20.29■□□□□ 0.84
TMEM53-201ENST00000372235 EHHADHQ08426 723 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 SNRNP35Q16560 246 aaKnown RBP20.29■□□□□ 0.84
TMEM53-201ENST00000372235 BMT2Q1RMZ1 405 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 ZNF528Q3MIS6 628 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 VITQ6UXI7 678 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 C12orf56Q8IXR9 622 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 CSGALNACT1Q8TDX6 532 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 FUBP3Q96I24 572 aaKnown RBP eCLIP20.29■□□□□ 0.84
TMEM53-201ENST00000372235 ZSWIM3Q96MP5 696 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 TASP1Q9H6P5 420 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 ZNF334Q9HCZ1 680 aaPredicted RBP20.29■□□□□ 0.84
TMEM53-201ENST00000372235 FBXO4Q9UKT5 387 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 PIEZO1Q92508 2521 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 TCHHQ07283 1943 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 SCN1AP35498 2009 aa20.29■□□□□ 0.84
TMEM53-201ENST00000372235 TSC2P49815 1807 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 HEPACAM2A8MVW5 462 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 LAMTOR5O43504 91 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 CMA1P23946 247 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 PLCB2Q00722 1185 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 GRM2Q14416 872 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 PPP2R5DQ14738 602 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 KNOP1Q1ED39 458 aaKnown RBP20.28■□□□□ 0.84
TMEM53-201ENST00000372235 ARHGAP29Q52LW3 1261 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 INTS6LQ5JSJ4 861 aaKnown RBP20.28■□□□□ 0.84
TMEM53-201ENST00000372235 ADGRF2Q8IZF7 708 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 CCDC47Q96A33 483 aaKnown RBP20.28■□□□□ 0.84
TMEM53-201ENST00000372235 CLDN23Q96B33 292 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 CCDC34Q96HJ3 373 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 HPDLQ96IR7 371 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 CEP295NLQ96MC4 621 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 C8orf33Q9H7E9 229 aaPredicted RBP20.28■□□□□ 0.84
TMEM53-201ENST00000372235 HEBP1Q9NRV9 189 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 THG1LQ9NWX6 298 aaKnown RBP20.28■□□□□ 0.84
TMEM53-201ENST00000372235 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
TMEM53-201ENST00000372235 GABRDO14764 452 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 GJA1P17302 382 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 TNNI1P19237 187 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 AFMP43652 599 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 AP3M2P53677 418 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 FCHO2Q0JRZ9 810 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 PSMD6Q15008 389 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 CFAP221Q4G0U5 840 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 GPR158Q5T848 1215 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 C4orf50Q6ZRC1 276 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 GAREM2Q75VX8 874 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 FRMD5Q7Z6J6 570 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 LRRTM3Q86VH5 581 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 ARID3BQ8IVW6 561 aaPredicted RBP20.27■□□□□ 0.84
TMEM53-201ENST00000372235 ZSWIM2Q8NEG5 633 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 CXorf38Q8TB03 319 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 SCFD1Q8WVM8 642 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 HPS3Q969F9 1004 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 SPATA32Q96LK8 384 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms