RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 RHOBTB2Q9BYZ6 727 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 BLZF1Q9H2G9 400 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 SMOC2Q9H3U7 446 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 MRPL44Q9H9J2 332 aaKnown RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 MAN1C1Q9NR34 630 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 TAB2Q9NYJ8 693 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.15□□□□□ -0.62
COL5A1-202ENST00000371820 CNTN3Q9P232 1028 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 SEL1LQ9UBV2 794 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 L1RE1Q9UN81 338 aa11.15□□□□□ -0.62
COL5A1-202ENST00000371820 MYO10Q9HD67 2058 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 TTC26A0AVF1 554 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 ABLIM1O14639 778 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 KLRC4O43908 158 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 CLTAP09496 248 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 GAP43P17677 238 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 RPL9P32969 192 aaKnown RBP11.14□□□□□ -0.63
COL5A1-202ENST00000371820 GOLGA8FQ08AF8 430 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 GOLGA8DPQ0D2H9 430 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 PSMD5Q16401 504 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 UPP1Q16831 310 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 GLE1Q53GS7 698 aaKnown RBP11.14□□□□□ -0.63
COL5A1-202ENST00000371820 BEND6Q5SZJ8 279 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-202ENST00000371820 LIN9Q5TKA1 542 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 TTI2Q6NXR4 508 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 ALKAL1Q6UXT8 129 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 TAS1R1Q7RTX1 841 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 HASPINQ8TF76 798 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 SYN2Q92777 582 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-202ENST00000371820 ACSF2Q96CM8 615 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-202ENST00000371820 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 PCMTD1Q96MG8 357 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-202ENST00000371820 PAAF1Q9BRP4 392 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 DESI2Q9BSY9 194 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 IRF2BPLQ9H1B7 796 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 FAM86C1Q9NVL1 165 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 ZDHHC7Q9NXF8 308 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 TBX20Q9UMR3 447 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 JRKLQ9Y4A0 524 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 NUB1Q9Y5A7 615 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 C2orf16Q68DN1 1984 aa11.14□□□□□ -0.63
COL5A1-202ENST00000371820 PLXNA3P51805 1871 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 F8W810 466 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 PES1O00541 588 aaKnown RBP11.13□□□□□ -0.63
COL5A1-202ENST00000371820 OGTO15294 1046 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 GALR2O43603 387 aaPredicted RBP11.13□□□□□ -0.63
COL5A1-202ENST00000371820 TCP1P17987 556 aaKnown RBP11.13□□□□□ -0.63
COL5A1-202ENST00000371820 OAS2P29728 719 aaKnown RBP11.13□□□□□ -0.63
COL5A1-202ENST00000371820 PAFAH1B1P43034 410 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 CLCNKBP51801 687 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 GTF2BQ00403 316 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 ALCAMQ13740 583 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 MAN2A1Q16706 1144 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 RTP2Q5QGT7 225 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 C10orf76Q5T2E6 689 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 SLFN12LQ6IEE8 588 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 LEKR1Q6ZMV7 388 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 ANKS3Q6ZW76 656 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 RTL10Q7L3V2 364 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 OTOP3Q7RTS5 596 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 MAP4K3Q8IVH8 894 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 CD302Q8IX05 232 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 TMEM105Q8N8V8 129 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 JAKMIP2Q96AA8 810 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 ZBTB45Q96K62 511 aaPredicted RBP11.13□□□□□ -0.63
COL5A1-202ENST00000371820 ALS2CR12Q96Q35 445 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 RPF1Q9H9Y2 349 aaKnown RBP11.13□□□□□ -0.63
COL5A1-202ENST00000371820 PIDD1Q9HB75 910 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 CACNG4Q9UBN1 327 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 LIMD1Q9UGP4 676 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 EXOC7Q9UPT5 735 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 USP34Q70CQ2 3546 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 CITO14578 2027 aa11.13□□□□□ -0.63
COL5A1-202ENST00000371820 CCDC195A0A1B0GUA6 201 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 SSU72P8A0A1W2PR75 194 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-202ENST00000371820 PODXLO00592 558 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 SYN3O14994 580 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 TGM5O43548 720 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 LCA5LO95447 670 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 FGFR3P22607 806 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 PAX3P23760 479 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 ARHGAP25P42331 645 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 VAV2P52735 878 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 ASIC1P78348 528 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 MTF1Q14872 753 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 SLC10A6Q3KNW5 377 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 VWA3BQ502W6 1294 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 PRSS55Q6UWB4 352 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-202ENST00000371820 STXBP4Q6ZWJ1 553 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 DYMQ7RTS9 669 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 PALB2Q86YC2 1186 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 IRF2BP1Q8IU81 584 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
COL5A1-202ENST00000371820 GLYCTKQ8IVS8 523 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms