RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 PLCB1Q9NQ66 1216 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ACSS2Q9NR19 701 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 KCNH7Q9NS40 1196 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 PDRG1Q9NUG6 133 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 BTBD7Q9P203 1132 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 RABL2AQ9UBK7 228 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 CNOT7Q9UIV1 285 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ZNF180Q9UJW8 692 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 TPCN1Q9ULQ1 816 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 TTLL3Q9Y4R7 772 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 AFG3L2Q9Y4W6 797 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 NR2E3Q9Y5X4 410 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 DGKBQ9Y6T7 804 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 NCOR1O75376 2440 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 OTOL1A6NHN0 477 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 YDJCA8MPS7 323 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 FAM25EA8MYX2 175 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 UBE2Q2LH0YL09 131 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PPIP5K2O43314 1243 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PCDHGA12O60330 932 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 NOBOXO60393 691 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 RAD17O75943 681 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 CAMTA2O94983 1202 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 INHBBP09529 407 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 ZSCAN20P17040 1043 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 ATF7P17544 494 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 GPR3P46089 330 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 KCNC1P48547 511 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 SCAND1P57086 179 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 APBA1Q02410 837 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 TMEM132BQ14DG7 1078 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 RILPL1Q5EBL4 403 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 CATSPEREQ5SY80 951 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 UTP14CQ5TAP6 766 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 HIBCHQ6NVY1 386 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 CCDC129Q6ZRS4 1044 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 EP400NLQ6ZTU2 488 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 TOGARAM2Q6ZUX3 1019 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 RASGRP2Q7LDG7 609 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 SP8Q8IXZ3 490 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 MAGEB6Q8N7X4 407 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 GIMAP8Q8ND71 665 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 IGDCC4Q8TDY8 1250 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 LMBR1Q8WVP7 490 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 IPCEF1Q8WWN9 437 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 C16orf92Q96LL3 132 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 AGAP3Q96P47 875 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 SARGQ9BW04 601 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 ZCCHC4Q9H5U6 513 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 DBNDD1Q9H9R9 158 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 TRMT1Q9NXH9 659 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 CROTQ9UKG9 612 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PNMA8BQ9ULN7 279 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 NOC2LQ9Y3T9 749 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PCDHGA9Q9Y5G4 932 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PCDHGA8Q9Y5G5 932 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PCDHGA7Q9Y5G6 932 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PCDHGA6Q9Y5G7 932 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PCDHGA3Q9Y5H0 932 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 PCDHGA2Q9Y5H1 932 aa5.67□□□□□ -1.5
ECHDC1-204ENST00000368292 BTBD11A6QL63 1104 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 GOLGA8AA7E2F4 631 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 GOLGA8BA8MQT2 603 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 TOR1BO14657 336 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 TMCC2O75069 709 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 H2AFYO75367 372 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 RFPL1O75677 317 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 KIAA0754O94854 1291 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 CYP17A1P05093 508 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 SETSIPP0DME0 302 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 HOXA5P20719 270 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 AOAHP28039 575 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 SDHAP31040 664 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 RXRGP48443 463 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 UBASH3AP57075 661 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 HERVK_113P62684 666 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 UBXN2AP68543 259 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 PLIN5Q00G26 463 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 DMTNQ08495 405 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 ODF1Q14990 250 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 AGAP9Q5VTM2 703 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 MCTP2Q6DN12 878 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 ISM2Q6H9L7 571 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 FAM109BQ6ICB4 259 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 PGM2L1Q6PCE3 622 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 C1orf228Q6PIY5 440 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 TDHQ8IZJ6 230 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 USP38Q8NB14 1042 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 TXNDC5Q8NBS9 432 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 NUP133Q8WUM0 1156 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 ERO1AQ96HE7 468 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 C20orf173Q96LM9 149 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 P2RX7Q99572 595 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 CDX2Q99626 313 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 SLX1AQ9BQ83 275 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 HTATIP2Q9BUP3 242 aa5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 MRPL9Q9BYD2 267 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-204ENST00000368292 KIAA1586Q9HCI6 787 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms