RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SPDYE16A6NNV3 312 aaPredicted RBP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 DNALI1O14645 258 aaPredicted RBP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 CETN2P41208 172 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 ORC1Q13415 861 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 CATSPERGQ6ZRH7 1159 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 ARHGEF18Q6ZSZ5 1173 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 ZBED8Q8IZ13 594 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 EBF2Q9HAK2 575 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 RXFP1Q9HBX9 757 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 EURLQ9NYK6 297 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 SGK1O00141 431 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 IGF2BP3O00425 579 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 TJP3O95049 919 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 ITGBL1O95965 494 aaPredicted RBP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 ASS1P00966 412 aaKnown RBP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 PIGRP01833 764 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 TAC1P20366 129 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 HIRAP54198 1017 aaPredicted RBP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 TFAMQ00059 246 aaKnown RBP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 ANGEL2Q5VTE6 544 aaKnown RBP15.96■□□□□ 0.15
CSDC2-201ENST00000306149 LRRC71Q8N4P6 559 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 ZWILCHQ9H900 591 aa15.96■□□□□ 0.15
CSDC2-201ENST00000306149 SIP14410 1827 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 A0A1B0GUA9 196 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 A8MUI8 341 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 NFKBIEO00221 500 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 KRT15P19012 456 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 UBA1P22314 1058 aaKnown RBP15.95■□□□□ 0.14
CSDC2-201ENST00000306149 ZNF132P52740 706 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 DNAJC3Q13217 504 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 DLK2Q6UY11 383 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 ALLCQ8N6M5 410 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 PRCCQ92733 491 aaPredicted RBP15.95■□□□□ 0.14
CSDC2-201ENST00000306149 ZBTB10Q96DT7 871 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 RBM41Q96IZ5 413 aaKnown RBP15.95■□□□□ 0.14
CSDC2-201ENST00000306149 PITPNM3Q9BZ71 974 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 VPS33BQ9H267 617 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 SLCO1B3Q9NPD5 702 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 STK38LQ9Y2H1 464 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 L3MBTL1Q9Y468 752 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 ADCY3O60266 1144 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 EAPPQ56P03 285 aaPredicted RBP15.95■□□□□ 0.14
CSDC2-201ENST00000306149 DCAF15Q66K64 600 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 PPP1R21Q6ZMI0 780 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 TRIM50Q86XT4 487 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 RIBC1Q8N443 379 aaPredicted RBP15.95■□□□□ 0.14
CSDC2-201ENST00000306149 GINM1Q9NU53 330 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 NXF1Q9UBU9 619 aaKnown RBP15.95■□□□□ 0.14
CSDC2-201ENST00000306149 PHIPQ8WWQ0 1821 aa15.95■□□□□ 0.14
CSDC2-201ENST00000306149 hCG_1818297A0A087WSY0 165 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 A0A1W2PPM1 405 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 FAM47DPA6NHR8 397 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ATG7O95352 703 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 GJB1P08034 283 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ABHD2P08910 425 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ALDH5A1P51649 535 aaPredicted RBP15.94■□□□□ 0.14
CSDC2-201ENST00000306149 OAZ1P54368 228 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 PDIA2Q13087 525 aaKnown RBP15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ACVR2BQ13705 512 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 RNF43Q68DV7 783 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 CEP128Q6ZU80 1094 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 TRABD2AQ86V40 505 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ERICH1Q86X53 443 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 THNSL1Q8IYQ7 743 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 KLHL29Q96CT2 875 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 CFAP57Q96MR6 1250 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 FOXP3Q9BZS1 431 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 GRID1Q9ULK0 1009 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 AFG3L2Q9Y4W6 797 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 TCRBV5S1A1TA0A578 114 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 RFC1P35251 1148 aaPredicted RBP15.94■□□□□ 0.14
CSDC2-201ENST00000306149 RAP1GAPP47736 663 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 STAT5BP51692 787 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 GDF10P55107 478 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 CCDC15Q0P6D6 951 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 MTFR1Q15390 333 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ASRGL1Q7L266 308 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 DEFB132Q7Z7B7 95 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ECHDC2Q86YB7 292 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 BRSK2Q8IWQ3 736 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 CEP120Q8N960 986 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ANKLE1Q8NAG6 615 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 GRAMD1AQ96CP6 724 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 L3MBTL3Q96JM7 780 aaPredicted RBP15.94■□□□□ 0.14
CSDC2-201ENST00000306149 TRABDQ9H4I3 376 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 ARHGEF3Q9NR81 526 aa15.94■□□□□ 0.14
CSDC2-201ENST00000306149 CD19P15391 556 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 SKIV2L2P42285 1042 aaKnown RBP15.93■□□□□ 0.14
CSDC2-201ENST00000306149 CDKN2BP42772 138 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 NRLP54845 237 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 LMNB2Q03252 620 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 TFDP3Q5H9I0 405 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 DENND1BQ6P3S1 775 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 EMC1Q8N766 993 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 UBR7Q8N806 425 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 TMEM35BQ8NCS4 154 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 JOSD2Q8TAC2 188 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 R3HDMLQ9H3Y0 253 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 POLIQ9UNA4 740 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms