RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 CDKAL1Q5VV42 579 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.47
CDCP1-201ENST00000296129 PARP9Q8IXQ6 854 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 PPIL6Q8IXY8 311 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 SH3KBP1Q96B97 665 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 PCDHB7Q9Y5E2 793 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 AKAP3O75969 853 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 TMEM259Q4ZIN3 620 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 C4orf19Q8IY42 314 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 IPMKQ8NFU5 416 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 CASKIN2Q8WXE0 1202 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 MROH8Q9H579 483 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 CAPN6Q9Y6Q1 641 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 CFAP73A6NFT4 308 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 PDCD2LQ9BRP1 358 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 CYP24A1Q07973 514 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 CENPPQ6IPU0 288 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 XPO6Q96QU8 1125 aaKnown RBP18.01■□□□□ 0.47
CDCP1-201ENST00000296129 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
CDCP1-201ENST00000296129 FOXP3Q9BZS1 431 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 ODC1P11926 461 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 DCUN1D1Q96GG9 259 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 SPATA17Q96L03 361 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 CCT8L2Q96SF2 557 aa18.01■□□□□ 0.47
CDCP1-201ENST00000296129 POLE2P56282 527 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 KIAA0895Q8NCT3 520 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 CARD9Q9H257 536 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 TASP1Q9H6P5 420 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18■□□□□ 0.47
CDCP1-201ENST00000296129 STAG3L1P0CL83 205 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 ETFBP38117 255 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 KDSRQ06136 332 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 STX3Q13277 289 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 KIZQ2M2Z5 673 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 TTC39BQ5VTQ0 682 aaPredicted RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 STKLD1Q8NE28 680 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 CASS4Q9NQ75 786 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 MARCOQ9UEW3 520 aaPredicted RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 SYF2O95926 243 aaKnown RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 VIL1P09327 827 aaKnown RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 ACTN3Q08043 901 aaPredicted RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 ACOT1Q86TX2 421 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 MCF2P10911 925 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 COBLL1Q53SF7 1204 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 LRRC8EQ6NSJ5 796 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 SLC30A10Q6XR72 485 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 YAF2Q8IY57 180 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 SLC26A7Q8TE54 656 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 ROPN1BQ9BZX4 212 aaPredicted RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 ROPN1Q9HAT0 212 aaPredicted RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 F8VZ95 297 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 EPHX2P34913 555 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 MAPRE2Q15555 327 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 TBCCQ15814 346 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 TEDDM1Q5T9Z0 273 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 THEMIS2Q5TEJ8 643 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 NRBF2Q96F24 287 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 TSPAN17Q96FV3 270 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 CENPKQ9BS16 269 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 KCNQ5Q9NR82 932 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 NDE1Q9NXR1 346 aa18■□□□□ 0.47
CDCP1-201ENST00000296129 ABI2Q9NYB9 513 aaPredicted RBP18■□□□□ 0.47
CDCP1-201ENST00000296129 TMEM120BA0PK00 339 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 MYO1DO94832 1006 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 ALDH1A1P00352 501 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 POLBP06746 335 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 UGP2Q16851 508 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 CYP2W1Q8TAV3 490 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 PNKPQ96T60 521 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 PPCSQ9HAB8 311 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 PRG3Q9Y2Y8 225 aaPredicted RBP17.99■□□□□ 0.47
CDCP1-201ENST00000296129 AP5Z1O43299 807 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 PDCD2Q16342 344 aaPredicted RBP17.99■□□□□ 0.47
CDCP1-201ENST00000296129 FIGNQ5HY92 759 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 C10orf120Q5SQS8 335 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 SLC47A2Q86VL8 602 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 TFB1MQ8WVM0 346 aaKnown RBP17.99■□□□□ 0.47
CDCP1-201ENST00000296129 ATG4AQ8WYN0 398 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 MTFR1LQ9H019 292 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 AK9Q5TCS8 1911 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 FAM86B1E9PN63 330 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 SPAG6O75602 509 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 FAM86B2P0C5J1 330 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 FNTAP49354 379 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 SLC29A2Q14542 456 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 FAM83AQ86UY5 434 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 EFHBQ8N7U6 833 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 TAS1R2Q8TE23 839 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 SLC20A1Q8WUM9 679 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 OPTNQ96CV9 577 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 M0QYT0 321 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 AARSP49588 968 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDCP1-201ENST00000296129 CTCFP49711 727 aaPredicted RBP17.99■□□□□ 0.47
CDCP1-201ENST00000296129 ZNF571Q7Z3V5 609 aaPredicted RBP17.99■□□□□ 0.47
CDCP1-201ENST00000296129 RNF180Q86T96 592 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 SGSM3Q96HU1 749 aa17.99■□□□□ 0.47
CDCP1-201ENST00000296129 PPP2R3BQ9Y5P8 575 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms