RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 ILDR1Q86SU0 546 aaPredicted RBP20.15■□□□□ 0.82
LSM11-201ENST00000286307 DAGLBQ8NCG7 672 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 ZFATQ9P243 1243 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 PCDHGB4Q9UN71 923 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.15■□□□□ 0.82
LSM11-201ENST00000286307 KDM1AO60341 852 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 CASP4P49662 377 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 PDK1Q15118 436 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 CCDC197Q8NCU1 140 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 AGR3Q8TD06 166 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 BCL2L12Q9HB09 334 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 RAB6BQ9NRW1 208 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 FBXL5Q9UKA1 691 aa20.15■□□□□ 0.82
LSM11-201ENST00000286307 TSPAN3O60637 253 aa20.14■□□□□ 0.82
LSM11-201ENST00000286307 TAF11Q15544 211 aa20.14■□□□□ 0.82
LSM11-201ENST00000286307 ZC3H15Q8WU90 426 aaKnown RBP20.14■□□□□ 0.82
LSM11-201ENST00000286307 FKBP1BP68106 108 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 PTPAQ15257 358 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 CBWD2Q8IUF1 395 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 RIOX2Q8IUF8 465 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 ADSSL1Q8N142 457 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 GBP7Q8N8V2 638 aaPredicted RBP20.14■□□□□ 0.81
LSM11-201ENST00000286307 BPIFA3Q9BQP9 254 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.14■□□□□ 0.81
LSM11-201ENST00000286307 DDX47Q9H0S4 455 aaKnown RBP20.14■□□□□ 0.81
LSM11-201ENST00000286307 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.14■□□□□ 0.81
LSM11-201ENST00000286307 FAM198AQ9UFP1 575 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 ZNF263O14978 683 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 FLT3LGP49771 235 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 PKN3Q6P5Z2 889 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 COPS5Q92905 334 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 MRPL17Q9NRX2 175 aaKnown RBP20.14■□□□□ 0.81
LSM11-201ENST00000286307 AP3B1O00203 1094 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 USP49Q70CQ1 688 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 POP1Q99575 1024 aaKnown RBP20.14■□□□□ 0.81
LSM11-201ENST00000286307 NDUFV1P49821 464 aa20.14■□□□□ 0.81
LSM11-201ENST00000286307 LAMB3Q13751 1172 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 FKBP1CQ5VVH2 108 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 FIBCD1Q8N539 461 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 ACSF2Q96CM8 615 aaPredicted RBP20.13■□□□□ 0.81
LSM11-201ENST00000286307 A1CFQ9NQ94 594 aaKnown RBP20.13■□□□□ 0.81
LSM11-201ENST00000286307 LGALS2P05162 132 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 RHOCP08134 193 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 MUTP22033 750 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 P3H1Q32P28 736 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 RBM23Q86U06 439 aaKnown RBP20.13■□□□□ 0.81
LSM11-201ENST00000286307 A0A087WUV0 522 aaPredicted RBP20.13■□□□□ 0.81
LSM11-201ENST00000286307 OPHN1O60890 802 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 OXCT1P55809 520 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 RD3Q7Z3Z2 195 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 C7orf61Q8IZ16 206 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 MAGEB10Q96LZ2 347 aaPredicted RBP20.13■□□□□ 0.81
LSM11-201ENST00000286307 MED4Q9NPJ6 270 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 CD274Q9NZQ7 290 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 NNTQ13423 1086 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 FBXO47Q5MNV8 452 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 NKX2-3Q8TAU0 364 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 FAM118BQ9BPY3 351 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 CAPN10Q9HC96 672 aa20.13■□□□□ 0.81
LSM11-201ENST00000286307 A0A0G2JND7 137 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 CTIFO43310 598 aaKnown RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 EDRF1Q3B7T1 1238 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 TRMT10CQ7L0Y3 403 aaKnown RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 KCTD17Q8N5Z5 321 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 KAZALD1Q96I82 304 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 OSBPL9Q96SU4 736 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 EFHD1Q9BUP0 239 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 KDM4CQ9H3R0 1056 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 Q9H521 79 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 RAB23Q9ULC3 237 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 PLAAQ9Y263 795 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 ZNF541Q9H0D2 1346 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 ACAT1P24752 427 aaKnown RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 MAPK9P45984 424 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 INPP1P49441 399 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 EPM2AIP1Q7L775 607 aaPredicted RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 LCA5Q86VQ0 697 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 WDR75Q8IWA0 830 aaKnown RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 RGL4Q8IZJ4 473 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 PPFIA2O75334 1257 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 EPB42P16452 691 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 CHRM3P20309 590 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 E2F5Q15329 346 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 EIF3BP55884 814 aaKnown RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 NFE2Q16621 373 aaPredicted RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 C4orf19Q8IY42 314 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 ZNF558Q96NG5 402 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 DBR1Q9UK59 544 aaKnown RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 MROH7Q68CQ1 1323 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 PMPCBO75439 489 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 DDX5P17844 614 aaKnown RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 TM4SF1P30408 202 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 CHORDC1Q9UHD1 332 aaPredicted RBP20.12■□□□□ 0.81
LSM11-201ENST00000286307 HPS5Q9UPZ3 1129 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 CDY2AQ9Y6F7 541 aa20.12■□□□□ 0.81
LSM11-201ENST00000286307 OCM2P0CE71 109 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 OCMP0CE72 109 aaPredicted RBP20.11■□□□□ 0.81
LSM11-201ENST00000286307 GRB10Q13322 594 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 SPARCL1Q14515 664 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms