RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 ABCB1P08183 1280 aaPredicted RBP12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 NFICP08651 508 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 FGFR2P21802 821 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 YWHABP31946 246 aaKnown RBP12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 RCN1Q15293 331 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 PHKG1Q16816 387 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 DAB2IPQ5VWQ8 1189 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 IZUMO1Q8IYV9 350 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 CENPLQ8N0S6 344 aaPredicted RBP12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 RNFT2Q96EX2 444 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 CHKBQ9Y259 395 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 SNX8Q9Y5X2 465 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 RGS4P49798 205 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 SLC25A24Q6NUK1 477 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 VPS37AQ8NEZ2 397 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 KIFC1Q9BW19 673 aa12.96□□□□□ -0.34
ARFGEF1-201ENST00000262215 CDH24Q86UP0 819 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 AGGF1Q8N302 714 aaeCLIP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 KCNB2Q92953 911 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 C10orf88Q9H8K7 445 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 SYBUQ9NX95 663 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 HPS5Q9UPZ3 1129 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 FNTAP49354 379 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 KLHL17Q6TDP4 642 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 ARID3BQ8IVW6 561 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 DPP10Q8N608 796 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 SLC25A13Q9UJS0 675 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 PADI4Q9UM07 663 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 MRPL42Q9Y6G3 142 aaKnown RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 MMP10P09238 476 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 DSG3P32926 999 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRAF2Q12933 501 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 RAET1EQ8TD07 263 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 KLHL2O95198 593 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 TXNP10599 105 aaKnown RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 WEE1P30291 646 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 C10orf120Q5SQS8 335 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 ZNF57Q68EA5 555 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 ALKBH2Q6NS38 261 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 DPF2Q92785 391 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 ZNF560Q96MR9 790 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 PDZK1P1A8MUH7 402 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 AGTP01019 485 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 YWHAQP27348 245 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 KCNJ6P48051 423 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 KCTD21Q4G0X4 260 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 ARMCX4Q5H9R4 360 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 STAP2Q9UGK3 403 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 MTFR1Q15390 333 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 HIST2H2ACQ16777 129 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 HIST2H2AA3Q6FI13 130 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 EPHX4Q8IUS5 362 aa12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 UTP15Q8TED0 518 aaKnown RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 OSBPL5Q9H0X9 879 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-201ENST00000262215 SPRP35270 261 aaPredicted RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 CNTN1Q12860 1018 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 AASDHQ4L235 1098 aaPredicted RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 TTC39BQ5VTQ0 682 aaPredicted RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 TTLL6Q8N841 843 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 AVENQ9NQS1 362 aaPredicted RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 RNF112Q9ULX5 631 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 EIF2S1P05198 315 aaKnown RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 NCAM1P13591 858 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 RRM2P31350 389 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 ITGA8P53708 1063 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 NCKAP1LP55160 1127 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 C16orf72Q14CZ0 275 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 FAM111AQ96PZ2 611 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 VTA1Q9NP79 307 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 DCDC2Q9UHG0 476 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 HAO1Q9UJM8 370 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 NAGPAQ9UK23 515 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 SMG5Q9UPR3 1016 aaKnown RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 PHF2O75151 1096 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 MAGEA4P43358 317 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 KLK7P49862 253 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 GALCP54803 685 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 POMGNT2Q8NAT1 580 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 NSL1Q96IY1 281 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 C6orf62Q9GZU0 229 aaPredicted RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 SERHL2Q9H4I8 314 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 SLC40A1Q9NP59 571 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 RUVBL2Q9Y230 463 aaKnown RBP12.94□□□□□ -0.34
ARFGEF1-201ENST00000262215 ITIH6Q6UXX5 1313 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms