RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 OR2W6PQ8NHA6 318 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 RNF25Q96BH1 459 aaPredicted RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 CITED4Q96RK1 184 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 LRRC1Q9BTT6 524 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 USP44Q9H0E7 712 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 POLRMTO00411 1230 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 RALBP11234 206 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 PDAP1Q13442 181 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 ATG14Q6ZNE5 492 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 C4orf33Q8N1A6 199 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 RNASE11Q8TAA1 199 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 GPR63Q9BZJ6 419 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 TM6SF1Q9BZW5 370 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 NDST4Q9H3R1 872 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 LATS2Q9NRM7 1088 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 CDC25CP30307 473 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 CDH18Q13634 790 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 SNF8Q96H20 258 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 AMACRQ9UHK6 382 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 POLG2Q9UHN1 485 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 WBP11Q9Y2W2 641 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 PITPNM2Q9BZ72 1349 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 ZBTB39O15060 712 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 NQO1P15559 274 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 CSTF3Q12996 717 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 SHROOM1Q2M3G4 852 aaPredicted RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 RHOT2Q8IXI1 618 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 TERB1Q8NA31 727 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 B3GALT6Q96L58 329 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 XPO6Q96QU8 1125 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 RNF146Q9NTX7 359 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 INTS13Q9NVM9 706 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 PRELID1Q9Y255 219 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 AREL1O15033 823 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 ZNF185O15231 689 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 BBOX1O75936 387 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 MLNP12872 115 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 C9orf131Q5VYM1 1079 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 DOK6Q6PKX4 331 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 KLHL23Q8NBE8 558 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 ROGDIQ9GZN7 287 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 AKAP7Q9P0M2 348 aaPredicted RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 PCNAP12004 261 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 SFSWAPQ12872 951 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 ADRM1Q16186 407 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 PMM1Q92871 262 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 TADA1Q96BN2 335 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 GOLGA4Q13439 2230 aaKnown RBP11.55□□□□□ -0.56
MSH6-201ENST00000234420 SEMA3EO15041 775 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 IDH3BO43837 385 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 DGKKQ5KSL6 1271 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 SERHLQ9NQF3 203 aa11.55□□□□□ -0.56
MSH6-201ENST00000234420 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 CCDC162PA2VCL2 907 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PPP6R2O75170 966 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 KRT20P35900 424 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 TALDO1P37837 337 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 STAT3P40763 770 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 SKIV2L2P42285 1042 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 SLC39A14Q15043 492 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PRR23BQ6ZRT6 265 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 KBTBD2Q8IY47 623 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PPP1R13LQ8WUF5 828 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 C1orf54Q8WWF1 131 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 GAS2L1Q99501 681 aaPredicted RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 IARS2Q9NSE4 1012 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 HAO1Q9UJM8 370 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PCDHA6Q9UN73 950 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 RBMX2Q9Y388 322 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 PCDHA8Q9Y5H6 950 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 HARS2P49590 506 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 BYSLQ13895 437 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 GATAD2AQ86YP4 633 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 KAT2BQ92831 832 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 TMEM169Q96HH4 297 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 ABCG4Q9H172 646 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 THAP9Q9H5L6 903 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 ITGA4P13612 1032 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PEX5P50542 639 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 YWHAZP63104 245 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 CCDC33Q8N5R6 958 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PCYOX1LQ8NBM8 494 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 MED8Q96G25 268 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 MAML3Q96JK9 1138 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 A2MP01023 1474 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 ATF4P18848 351 aaPredicted RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 QARSP47897 775 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 ZNF284Q2VY69 593 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 RELTQ969Z4 430 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 KLHL2O95198 593 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 CYP19A1P11511 503 aaPredicted RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 CTSEP14091 401 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 261.5 ms