RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CHI3L1P36222 383 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 C16orf86Q6ZW13 317 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 TFB1MQ8WVM0 346 aaKnown RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 FAM151AQ8WW52 585 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 DEFB129Q9H1M3 183 aa13.81□□□□□ -0.2
COL1A1-201ENST00000225964 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-201ENST00000225964 UBE2Q2LH0YL09 131 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 FAM107AO95990 144 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 TCN1P20061 433 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 SERPINB10P48595 397 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 PWP1Q13610 501 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 CNGA3Q16281 694 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 SPATA18Q8TC71 538 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 UCMAQ8WVF2 138 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 FHOD1Q9Y613 1164 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 NBPF26B4DH59 902 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 SERPINI2O75830 405 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 ERVK-10P10266 1014 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 GRAMD1AQ96CP6 724 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 CHST12Q9NRB3 414 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 NYAP2Q9P242 653 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 UVRAGQ9P2Y5 699 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 FBXO2Q9UK22 296 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 DBR1Q9UK59 544 aaKnown RBP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 MYO1CO00159 1063 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 VWA5AO00534 786 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 DGKIO75912 1065 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 PTPN7P35236 360 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 KCNK10P57789 538 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 PLCL1Q15111 1095 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 LRRC8BQ6P9F7 803 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 ZNF438Q7Z4V0 828 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 CPB2Q96IY4 423 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 PSMC3IPQ9P2W1 217 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 SPACA6W5XKT8 324 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 APOA1P02647 267 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 APOA4P06727 396 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 PNPLA4P41247 253 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 PAK5Q9P286 719 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 TRMT6Q9UJA5 497 aaKnown RBP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 IGSF9BQ9UPX0 1349 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 ADCY10Q96PN6 1610 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 A0A1W2PQC6 194 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 VCLP18206 1134 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 KRT78Q8N1N4 520 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 BLOC1S5Q8TDH9 187 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 FBXO32Q969P5 355 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 MTA3Q9BTC8 594 aa13.8□□□□□ -0.2
COL1A1-201ENST00000225964 DDX28Q9NUL7 540 aaKnown RBP13.8□□□□□ -0.2
COL1A1-201ENST00000225964 TNIP2Q8NFZ5 429 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ZKSCAN4Q969J2 545 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ALFQ53S48 1182 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 BBS7Q8IWZ6 715 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 RBM15Q96T37 977 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 PHF20Q9BVI0 1012 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 OSBPL1AQ9BXW6 950 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 GTF2A1LQ9UNN4 478 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 TET3O43151 1660 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 GLI2P10070 1586 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 GALCP54803 685 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 NCKAP1LP55160 1127 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ORC1Q13415 861 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 IYDQ6PHW0 289 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 HHIPL2Q6UWX4 724 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 INPP5DQ92835 1189 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ATG4CQ96DT6 458 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 C2orf81A6NN90 581 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 M0QYT0 321 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 AIM2O14862 343 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 SYNCRIPO60506 623 aaKnown RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 EGFRP00533 1210 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 PDHBP11177 359 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 E2F4Q16254 413 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ANKRD49Q8WVL7 239 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 RIC8BQ9NVN3 520 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 RNF112Q9ULX5 631 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 CAB39Q9Y376 341 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 NCF1BA6NI72 391 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 NCF1CA8MVU1 366 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 CKBP12277 381 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 NCF1P14598 390 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 MAPK9P45984 424 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 DMTNQ08495 405 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 CNTN1Q12860 1018 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 BYSLQ13895 437 aaKnown RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 CDR2LQ86X02 465 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ZNF614Q8N883 585 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 WNK4Q96J92 1243 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 PRPF18Q99633 342 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms