RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W MRPS28P21771 286 aa1.4□□□□□ -2.19
MSL1YIR009W CNB1P25296 175 aa1.4□□□□□ -2.19
MSL1YIR009W AHC2P25649 128 aa1.4□□□□□ -2.19
MSL1YIR009W MRPL17P36528 281 aa1.4□□□□□ -2.19
MSL1YIR009W FIG1P38224 298 aa1.4□□□□□ -2.19
MSL1YIR009W AVT2P39981 480 aa1.4□□□□□ -2.19
MSL1YIR009W YJR146WP47174 117 aa1.4□□□□□ -2.19
MSL1YIR009W SBH2P52871 88 aa1.4□□□□□ -2.19
MSL1YIR009W RIO1Q12196 484 aaKnown RBP1.4□□□□□ -2.19
MSL1YIR009W TSC3Q3E790 80 aa1.4□□□□□ -2.19
MSL1YIR009W YPR014CQ6B0W2 109 aa1.4□□□□□ -2.19
MSL1YIR009W YML100W-AQ8TGT0 57 aa1.4□□□□□ -2.19
MSL1YIR009W FIG2P25653 1609 aa1.4□□□□□ -2.19
MSL1YIR009W MEC1P38111 2368 aa1.4□□□□□ -2.19
MSL1YIR009W CCA1P21269 546 aa1.39□□□□□ -2.19
MSL1YIR009W ATP15P21306 62 aa1.39□□□□□ -2.19
MSL1YIR009W SCM4P32564 187 aa1.39□□□□□ -2.19
MSL1YIR009W UBC6P33296 250 aaPredicted RBP1.39□□□□□ -2.19
MSL1YIR009W YKL102CP34249 101 aa1.39□□□□□ -2.19
MSL1YIR009W CLG1P35190 452 aa1.39□□□□□ -2.19
MSL1YIR009W MAK5P38112 773 aaPredicted RBP1.39□□□□□ -2.19
MSL1YIR009W FES1P38260 290 aa1.39□□□□□ -2.19
MSL1YIR009W OPY1P38271 328 aa1.39□□□□□ -2.19
MSL1YIR009W YHL026CP38740 315 aa1.39□□□□□ -2.19
MSL1YIR009W YHR180WP38868 163 aa1.39□□□□□ -2.19
MSL1YIR009W FCY21P40039 528 aa1.39□□□□□ -2.19
MSL1YIR009W PGD1P40356 397 aa1.39□□□□□ -2.19
MSL1YIR009W CIS3P47001 227 aa1.39□□□□□ -2.19
MSL1YIR009W JAC1P53193 184 aa1.39□□□□□ -2.19
MSL1YIR009W YGR219WP53307 113 aa1.39□□□□□ -2.19
MSL1YIR009W SWP1Q02795 286 aa1.39□□□□□ -2.19
MSL1YIR009W YMR099CQ03161 297 aaKnown RBP1.39□□□□□ -2.19
MSL1YIR009W NEJ1Q06148 342 aa1.39□□□□□ -2.19
MSL1YIR009W YLR031WQ07978 186 aa1.39□□□□□ -2.19
MSL1YIR009W YLR050CQ12155 161 aaKnown RBP1.39□□□□□ -2.19
MSL1YIR009W UBR1P19812 1950 aa1.39□□□□□ -2.19
MSL1YIR009W CYR1P08678 2026 aaKnown RBP1.39□□□□□ -2.19
MSL1YIR009W APC1P53886 1748 aa1.38□□□□□ -2.19
MSL1YIR009W LYS2P07702 1392 aa1.38□□□□□ -2.19
MSL1YIR009W KRE5P22023 1365 aa1.38□□□□□ -2.19
MSL1YIR009W YRF1-3P0CX14 1859 aa1.38□□□□□ -2.19
MSL1YIR009W YRF1-7P0CX15 1859 aa1.38□□□□□ -2.19
MSL1YIR009W YRF1-6P53819 1859 aa1.38□□□□□ -2.19
MSL1YIR009W CPA1P07258 411 aaKnown RBP1.38□□□□□ -2.19
MSL1YIR009W ARO7P32178 256 aa1.38□□□□□ -2.19
MSL1YIR009W SDH4P37298 181 aa1.38□□□□□ -2.19
MSL1YIR009W DER1P38307 211 aa1.38□□□□□ -2.19
MSL1YIR009W MTW1P39731 289 aa1.38□□□□□ -2.19
MSL1YIR009W RSM25P40496 264 aa1.38□□□□□ -2.19
MSL1YIR009W PRM10P42946 383 aa1.38□□□□□ -2.19
MSL1YIR009W FMP32P43557 207 aa1.38□□□□□ -2.19
MSL1YIR009W YJL144WP47009 104 aa1.38□□□□□ -2.19
MSL1YIR009W GPI14P47088 403 aaKnown RBP1.38□□□□□ -2.19
MSL1YIR009W GPI17Q04080 534 aa1.38□□□□□ -2.19
MSL1YIR009W ARR2Q06597 130 aa1.38□□□□□ -2.19
MSL1YIR009W YOR342CQ12182 319 aa1.38□□□□□ -2.19
MSL1YIR009W PET20Q99373 253 aa1.38□□□□□ -2.19
MSL1YIR009W PDR18P53756 1333 aa1.38□□□□□ -2.19
MSL1YIR009W RIM15P43565 1770 aa1.37□□□□□ -2.19
MSL1YIR009W RPL26AP05743 127 aaKnown RBP1.37□□□□□ -2.19
MSL1YIR009W CMD1P06787 147 aaKnown RBP1.37□□□□□ -2.19
MSL1YIR009W NSP1P14907 823 aaKnown RBP1.37□□□□□ -2.19
MSL1YIR009W PAN3P36102 679 aaPredicted RBP1.37□□□□□ -2.19
MSL1YIR009W TVP23P38962 199 aa1.37□□□□□ -2.19
MSL1YIR009W YEA4P40004 342 aa1.37□□□□□ -2.19
MSL1YIR009W GVP36P40531 326 aaKnown RBP1.37□□□□□ -2.19
MSL1YIR009W SER2P42941 309 aa1.37□□□□□ -2.19
MSL1YIR009W YJL027CP47063 138 aaPredicted RBP1.37□□□□□ -2.19
MSL1YIR009W SOL1P50278 321 aa1.37□□□□□ -2.19
MSL1YIR009W RPL26BP53221 127 aaKnown RBP1.37□□□□□ -2.19
MSL1YIR009W YNR077CP53758 84 aa1.37□□□□□ -2.19
MSL1YIR009W MAK3Q03503 176 aa1.37□□□□□ -2.19
MSL1YIR009W PLP1Q04004 230 aa1.37□□□□□ -2.19
MSL1YIR009W HRT1Q08273 121 aa1.37□□□□□ -2.19
MSL1YIR009W MPD1Q12404 318 aaKnown RBP1.37□□□□□ -2.19
MSL1YIR009W FAS2P19097 1887 aaKnown RBP1.37□□□□□ -2.19
MSL1YIR009W YCR023CP25351 611 aa1.36□□□□□ -2.19
MSL1YIR009W MEI4P29467 408 aa1.36□□□□□ -2.19
MSL1YIR009W OCH1P31755 480 aa1.36□□□□□ -2.19
MSL1YIR009W EDC3P39998 551 aaKnown RBP1.36□□□□□ -2.19
MSL1YIR009W RPL33BP41056 107 aaKnown RBP1.36□□□□□ -2.19
MSL1YIR009W TMA22P47089 198 aaPredicted RBP1.36□□□□□ -2.19
MSL1YIR009W SBH1P52870 82 aa1.36□□□□□ -2.19
MSL1YIR009W PGA1P53896 198 aa1.36□□□□□ -2.19
MSL1YIR009W NUP49Q02199 472 aa1.36□□□□□ -2.19
MSL1YIR009W YDR476CQ03362 224 aa1.36□□□□□ -2.19
MSL1YIR009W MRPS8Q03799 155 aa1.36□□□□□ -2.19
MSL1YIR009W HPT1Q04178 221 aaKnown RBP1.36□□□□□ -2.19
MSL1YIR009W DYN3Q04949 312 aa1.36□□□□□ -2.19
MSL1YIR009W YPR127WQ06494 345 aa1.36□□□□□ -2.19
MSL1YIR009W YLR053CQ12026 108 aa1.36□□□□□ -2.19
MSL1YIR009W RDI1Q12434 202 aa1.36□□□□□ -2.19
MSL1YIR009W POR1P04840 283 aaKnown RBP1.35□□□□□ -2.19
MSL1YIR009W BUB2P26448 306 aaPredicted RBP1.35□□□□□ -2.19
MSL1YIR009W MDH3P32419 343 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
MSL1YIR009W SNC2P33328 115 aa1.35□□□□□ -2.19
MSL1YIR009W YET1P35723 206 aa1.35□□□□□ -2.19
MSL1YIR009W TVP38P36164 337 aa1.35□□□□□ -2.19
MSL1YIR009W CSH1P38287 376 aa1.35□□□□□ -2.19
MSL1YIR009W UMP1P38293 148 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms