RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-280	ENST00000640311	IQCE	Q6IPM2	695 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	TMEM86A	Q8N2M4	240 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	PDCL2	Q8N4E4	241 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	OR10T2	Q8NGX3	314 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	CXorf38	Q8TB03	319 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	PARD3B	Q8TEW8	1205 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	ZNF516	Q92618	1163 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	ZNF512	Q96ME7	567 aa	Predicted RBP	10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	TSG101	Q99816	390 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	CORO1B	Q9BR76	489 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	C1QTNF1	Q9BXJ1	281 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	GTPBP4	Q9BZE4	634 aa	Known RBP	10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	HCFC1R1	Q9NWW0	138 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	DDX43	Q9NXZ2	648 aa	Known RBP	10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	MAFF	Q9ULX9	164 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	L1RE1	Q9UN81	338 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	SLC27A5	Q9Y2P5	690 aa		10.84	□□□□□ -0.67
KCNMA1-280	ENST00000640311	ANK1	P16157	1881 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MTMR11	A4FU01	709 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ASGR2	P07307	311 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	KRT13	P13646	458 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ACAT1	P24752	427 aa	Known RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PSMC2	P35998	433 aa	Known RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ALDH1A3	P47895	512 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	AP3M2	P53677	418 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	TNNC1	P63316	161 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	DLG4	P78352	724 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MYL7	Q01449	175 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	TSPY1	Q01534	308 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	CAMK4	Q16566	473 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PTPN21	Q16825	1174 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	SOWAHA	Q2M3V2	549 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	WDR72	Q3MJ13	1102 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MGAT5B	Q3V5L5	792 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	FAM186B	Q8IYM0	893 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	DCP1B	Q8IZD4	617 aa	Known RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ADGRF2	Q8IZF7	708 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ZDHHC14	Q8IZN3	488 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	TOP6BL	Q8N6T0	577 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ATAD1	Q8NBU5	361 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	SPATA20	Q8TB22	786 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	FAM200A	Q8TCP9	573 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PLEKHO2	Q8TD55	490 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	TMEM174	Q8WUU8	243 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	EEF2KMT	Q96G04	330 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	SEPT5	Q99719	369 aa	Predicted RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	RTP3	Q9BQQ7	232 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ZCWPW1	Q9H0M4	648 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MMRN2	Q9H8L6	949 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	GDAP2	Q9NXN4	497 aa		10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ABI2	Q9NYB9	513 aa	Predicted RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	DNMT3B	Q9UBC3	853 aa	Known RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	NXF1	Q9UBU9	619 aa	Known RBP	10.83	□□□□□ -0.68
KCNMA1-280	ENST00000640311	FAM86C2P	A6NEL3	165 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	BIN1	O00499	593 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PSMA7	O14818	248 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	CETN3	O15182	167 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	N4BP1	O75113	896 aa	Known RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	AKAP3	O75969	853 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PAPLN	O95428	1278 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	RHO	P08100	348 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	LHX1	P48742	406 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	VAMP7	P51809	220 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	EPHB3	P54753	998 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MYL6	P60660	151 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PLD1	Q13393	1074 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MTMR3	Q13615	1198 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	TAF12	Q16514	161 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	NFIL3	Q16649	462 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	EDRF1	Q3B7T1	1238 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	CYP4A22	Q5TCH4	519 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	TDRD10	Q5VZ19	366 aa	Known RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	CENPP	Q6IPU0	288 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	INTS8	Q75QN2	995 aa	Known RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PDZD4	Q76G19	769 aa	Predicted RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	DPH6	Q7L8W6	267 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ING5	Q8WYH8	240 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	EDA	Q92838	391 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	SYAP1	Q96A49	352 aa	Predicted RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	IPO9	Q96P70	1041 aa	Known RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MYADM	Q96S97	322 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	ACBD6	Q9BR61	282 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	GZF1	Q9H116	711 aa	Predicted RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	SNX25	Q9H3E2	840 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MAN1B1	Q9UKM7	699 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	GTF3C4	Q9UKN8	822 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	SORCS3	Q9UPU3	1222 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MRPS23	Q9Y3D9	190 aa	Known RBP	10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	YIPF1	Q9Y548	306 aa		10.82	□□□□□ -0.68
KCNMA1-280	ENST00000640311	IKBKB	O14920	756 aa		10.81	□□□□□ -0.68
KCNMA1-280	ENST00000640311	MAPK13	O15264	365 aa		10.81	□□□□□ -0.68
KCNMA1-280	ENST00000640311	SOAT2	O75908	522 aa		10.81	□□□□□ -0.68
KCNMA1-280	ENST00000640311	VNN2	O95498	520 aa		10.81	□□□□□ -0.68
KCNMA1-280	ENST00000640311	C4BPA	P04003	597 aa	Known RBP	10.81	□□□□□ -0.68
KCNMA1-280	ENST00000640311	POU2F2	P09086	479 aa		10.81	□□□□□ -0.68
KCNMA1-280	ENST00000640311	PDGFRB	P09619	1106 aa		10.81	□□□□□ -0.68
KCNMA1-280	ENST00000640311	EPB41	P11171	864 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms