RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 A8MXQ7 604 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 TMEM189-UBE2V1I3L0A0 370 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 CILPO75339 1184 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 LINC00271P0C7V0 271 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 LAG3P18627 525 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 CCDC142Q17RM4 750 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
VPS45-212ENST00000611412 TAF3Q5VWG9 929 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 IRF2BP2Q7Z5L9 587 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 LRRC8AQ8IWT6 810 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 FAM71AQ8IYT1 594 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 TOP6BLQ8N6T0 577 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 IGSF21Q96ID5 467 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 FAM81BQ96LP2 452 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 VN1R3Q9BXE9 311 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 SNX25Q9H3E2 840 aa12.74□□□□□ -0.37
VPS45-212ENST00000611412 LINC01553A4QN01 128 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 M0QZQ0 153 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 CA3P07451 260 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 PSMC1P62191 440 aaKnown RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 TDRD12Q587J7 1177 aaKnown RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 ACOT1Q86TX2 421 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 SLC39A11Q8N1S5 342 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 SLC20A1Q8WUM9 679 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 C17orf80Q9BSJ5 609 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 HAUS4Q9H6D7 363 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 ZNHIT6Q9NWK9 470 aaKnown RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 AIPL1Q9NZN9 384 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 BARX2Q9UMQ3 279 aaPredicted RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 GBF1Q92538 1859 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 ATP2C2O75185 946 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 TACC1O75410 805 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 FERP16591 822 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 RAD23BP54727 409 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 YWHAEP62258 255 aaKnown RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 KLHL30Q0D2K2 578 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 INCA1Q0VD86 236 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 HGSNATQ68CP4 663 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 LIMS2Q7Z4I7 341 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 NOP9Q86U38 636 aaKnown RBP12.73□□□□□ -0.37
VPS45-212ENST00000611412 C12orf29Q8N999 325 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 SLC4A11Q8NBS3 891 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 TMEM169Q96HH4 297 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 PANX2Q96RD6 677 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 KCNF1Q9H3M0 494 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 ARHGAP20Q9P2F6 1191 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 MYO6Q9UM54 1294 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 DAAM1Q9Y4D1 1078 aa12.73□□□□□ -0.37
VPS45-212ENST00000611412 SF3B1O75533 1304 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS45-212ENST00000611412 TSC2P49815 1807 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 SOWAHDA6NJG2 315 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 C2CD2LO14523 706 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 TRAPPC3O43617 180 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 CFHP08603 1231 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 CD19P15391 556 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 WARSP23381 471 aaKnown RBP12.72□□□□□ -0.37
VPS45-212ENST00000611412 BRD2P25440 801 aaKnown RBP12.72□□□□□ -0.37
VPS45-212ENST00000611412 GNA15P30679 374 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 CTNNB1P35222 781 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 ZNF132P52740 706 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 MTF1Q14872 753 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 RTP2Q5QGT7 225 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 KIAA0319Q5VV43 1072 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 OVOS1Q6IE37 1185 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 METTL23Q86XA0 190 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 TMEM139Q8IV31 216 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 TMEM176AQ96HP8 235 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 TMEM209Q96SK2 561 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 BAG1Q99933 345 aaPredicted RBP12.72□□□□□ -0.37
VPS45-212ENST00000611412 RTP3Q9BQQ7 232 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 NUCKS1Q9H1E3 243 aaKnown RBP12.72□□□□□ -0.37
VPS45-212ENST00000611412 CERS4Q9HA82 394 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 STXBP5LQ9Y2K9 1186 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 PCDHB12Q9Y5F1 795 aa12.72□□□□□ -0.37
VPS45-212ENST00000611412 CHD9Q3L8U1 2897 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 THAP12O43422 761 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 SERPING1P05155 500 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 CYP11B1P15538 503 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 YWHAHQ04917 246 aaPredicted RBP12.71□□□□□ -0.37
VPS45-212ENST00000611412 PTK2Q05397 1052 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
VPS45-212ENST00000611412 ZNF571Q7Z3V5 609 aaPredicted RBP12.71□□□□□ -0.37
VPS45-212ENST00000611412 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 EPS8L1Q8TE68 723 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 TFAP2BQ92481 460 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 CLP1Q92989 425 aaKnown RBP12.71□□□□□ -0.37
VPS45-212ENST00000611412 HEXIM2Q96MH2 286 aaKnown RBP12.71□□□□□ -0.37
VPS45-212ENST00000611412 ZSWIM1Q9BR11 485 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 PBX4Q9BYU1 374 aa12.71□□□□□ -0.37
VPS45-212ENST00000611412 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms