RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ZNF233A6NK53 670 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 STK25O00506 426 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 RFX1P22670 979 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 FCARP24071 287 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 TUFMP49411 452 aaKnown RBP19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 SLC44A4Q53GD3 710 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 WSCD1Q658N2 575 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 TANGO2Q6ICL3 276 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 TMC8Q8IU68 726 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 DTWD2Q8NBA8 298 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 SPRYD3Q8NCJ5 442 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 HPS3Q969F9 1004 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 ASB16Q96NS5 453 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 PHOX2BQ99453 314 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 DDX23Q9BUQ8 820 aaKnown RBP19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 TRPV4Q9HBA0 871 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 ZFP14Q9HCL3 533 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 AGAP1Q9UPQ3 857 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 SLC27A5Q9Y2P5 690 aa19.33■□□□□ 0.68
CHMP2A-203ENST00000597209 TCHHQ07283 1943 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 ITGB3P05106 788 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 MYL4P12829 197 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 POLR2BP30876 1174 aaKnown RBP19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 RBP5P82980 135 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 FAM78AQ5JUQ0 283 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 SPATA18Q8TC71 538 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 SPPL2BQ8TCT7 592 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 PSMG2Q969U7 264 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 PLA2G2FQ9BZM2 168 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 PDE11AQ9HCR9 933 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 GDAP2Q9NXN4 497 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 HSPBP1Q9NZL4 362 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 SIT1Q9Y3P8 196 aa19.32■□□□□ 0.68
CHMP2A-203ENST00000597209 PROB1E7EW31 1015 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 NRG2O14511 850 aaPredicted RBP19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 TGFB1I1O43294 461 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 FGF19O95750 216 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 TMEM191BP0C7N4 346 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 MLF2Q15773 248 aaPredicted RBP19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 BMT2Q1RMZ1 405 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 SLC39A12Q504Y0 691 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 DNAJB7Q7Z6W7 309 aaPredicted RBP19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 ITIH5Q86UX2 942 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 DCP1BQ8IZD4 617 aaKnown RBP19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 TMEM86AQ8N2M4 240 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 CSGALNACT2Q8N6G5 542 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 SHKBP1Q8TBC3 707 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 SMARCD2Q92925 531 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 ANKRD36BP1Q96IX9 119 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 OSBPL6Q9BZF3 934 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 INTS13Q9NVM9 706 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 DLGAP2Q9P1A6 1054 aa19.31■□□□□ 0.68
CHMP2A-203ENST00000597209 KANSL1LA0AUZ9 987 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 HUS1O60921 280 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 SLFN14P0C7P3 912 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 NBL1P41271 181 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 SNW1Q13573 536 aaKnown RBP19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 LRRTM3Q86VH5 581 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 CEP57L1Q8IYX8 460 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 PDCL2Q8N4E4 241 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 TTC9BQ8N6N2 239 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 PJA1Q8NG27 643 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 NOC3LQ8WTT2 800 aaKnown RBP19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 SCFD1Q8WVM8 642 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 DNASE1L2Q92874 299 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 E2F7Q96AV8 911 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 ZSWIM3Q96MP5 696 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 ACBD6Q9BR61 282 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 BLZF1Q9H2G9 400 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 AGPAT3Q9NRZ7 376 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 FAM86C1Q9NVL1 165 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 CGNQ9P2M7 1197 aaKnown RBP19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 SIX4Q9UIU6 781 aa19.3■□□□□ 0.68
CHMP2A-203ENST00000597209 CACNA1HO95180 2353 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 HAPLN1P10915 354 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 CUL4BQ13620 913 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 TEAD2Q15562 447 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 DUOXA2Q1HG44 320 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 DPH6Q7L8W6 267 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 CBWD2Q8IUF1 395 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 TOP6BLQ8N6T0 577 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 ZSCAN18Q8TBC5 510 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 DEPDC1BQ8WUY9 529 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 LEO1Q8WVC0 666 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 TRMT61BQ9BVS5 477 aaKnown RBP19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 MTMR12Q9C0I1 747 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 TRPV5Q9NQA5 729 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 USP25Q9UHP3 1055 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 SERTAD1Q9UHV2 236 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 L1RE1Q9UN81 338 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 ZDHHC9Q9Y397 364 aa19.29■□□□□ 0.68
CHMP2A-203ENST00000597209 A0A1W2PRU2 124 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 TNNC2P02585 160 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 KRT19P08727 400 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 GJA1P17302 382 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 PSMC3P17980 439 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 CMA1P23946 247 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 CASP1P29466 404 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 AFMP43652 599 aa19.28■□□□□ 0.68
CHMP2A-203ENST00000597209 TSPY1Q01534 308 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms