RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 DUOXA2Q1HG44 320 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 CLEC16AQ2KHT3 1053 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 FBXO47Q5MNV8 452 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 SCARA3Q6AZY7 606 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 C11orf63Q6NUN7 778 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 CDR2LQ86X02 465 aaPredicted RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 THNSL1Q8IYQ7 743 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 NOA1Q8NC60 698 aaKnown RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 TAF4BQ92750 862 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 APBB2Q92870 758 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 TOP1MTQ969P6 601 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 ANKRD36BP1Q96IX9 119 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 CPB2Q96IY4 423 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 C17orf80Q9BSJ5 609 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 COL25A1Q9BXS0 654 aaPredicted RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 IMPG2Q9BZV3 1241 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 THAP2Q9H0W7 228 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 ASB7Q9H672 318 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 VRTNQ9H8Y1 702 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 RPF1Q9H9Y2 349 aaKnown RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 ACP6Q9NPH0 428 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 SIX4Q9UIU6 781 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 GTF3C4Q9UKN8 822 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 PCDHB2Q9Y5E7 798 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 TRPV2Q9Y5S1 764 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 MTCH2Q9Y6C9 303 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 LACTBL1A8MY62 500 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 TMCO5BA8MYB1 307 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 PHACTR2O75167 634 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 ERLIN2O94905 339 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 STAU1O95793 577 aaKnown RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 TNNC2P02585 160 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 FTLP02792 175 aaPredicted RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 CYP1A1P04798 512 aaPredicted RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 CYP1A2P05177 515 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 NFICP08651 508 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 UNGP13051 313 aaPredicted RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 KRT5P13647 590 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 DARSP14868 501 aaKnown RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 ASPAP45381 313 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 NAP1L1P55209 391 aaKnown RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 MYL6P60660 151 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 CENPCQ03188 943 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 TMEM132AQ24JP5 1023 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 SGSM1Q2NKQ1 1148 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 SLC10A6Q3KNW5 377 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 TAF3Q5VWG9 929 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 TRIM72Q6ZMU5 477 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 NT5DC3Q86UY8 548 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 NME8Q8N427 588 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 MMGT1Q8N4V1 131 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 RBBP8NLQ8NC74 664 aaPredicted RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 SLC35G2Q8TBE7 412 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 GDPD5Q8WTR4 605 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 HES6Q96HZ4 224 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 CAPZA3Q96KX2 299 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 TGS1Q96RS0 853 aaKnown RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 BCO2Q9BYV7 579 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 GCOM2Q9BZD3 368 aaPredicted RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 SEPT11Q9NVA2 429 aaKnown RBP10.04□□□□□ -0.8
VPS25-205ENST00000590339 RAB21Q9UL25 225 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 COG5Q9UP83 839 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
VPS25-205ENST00000590339 TRIP11Q15643 1979 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 TET1Q8NFU7 2136 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 COL6A3P12111 3177 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 CSDE1O75534 798 aaKnown RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 CST3P01034 146 aaPredicted RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 ABCB4P21439 1286 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 AXLP30530 894 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 HOXA11P31270 313 aaPredicted RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 NOP2P46087 812 aaKnown RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 CLCN6P51797 869 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 OSTNP61366 133 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 ERVK-21P61565 698 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 NOMO3P69849 1222 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 GPC5P78333 572 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 HTRA4P83105 476 aaPredicted RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 TFAMQ00059 246 aaKnown RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 PAK2Q13177 524 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 KIZQ2M2Z5 673 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 ZNF699Q32M78 642 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 JADE1Q6IE81 842 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 ACAD10Q6JQN1 1059 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 RTN4RL1Q86UN2 441 aaPredicted RBP10.03□□□□□ -0.8
VPS25-205ENST00000590339 CD302Q8IX05 232 aa10.03□□□□□ -0.8
VPS25-205ENST00000590339 UBE2Q2Q8WVN8 375 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms