RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CYP26C1Q6V0L0 522 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ANKS3Q6ZW76 656 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 MTSS1LQ765P7 747 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 PDZD4Q76G19 769 aaPredicted RBP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ATAD1Q8NBU5 361 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ZNF461Q8TAF7 563 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 SHKBP1Q8TBC3 707 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ZSCAN18Q8TBC5 510 aaPredicted RBP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ATRIPQ8WXE1 791 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 NXPE3Q969Y0 559 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 SHDQ96IW2 340 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ACAP3Q96P50 834 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CDK15Q96Q40 435 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 KIF2CQ99661 725 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 LPIN3Q9BQK8 851 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 RHOBTB2Q9BYZ6 727 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 DNAJC25Q9H1X3 360 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 SLITRK6Q9H5Y7 841 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 TNFSF13BQ9Y275 285 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 PIAS3Q9Y6X2 628 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 PATJQ8NI35 1801 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CNOT1A5YKK6 2376 aaKnown RBP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ZZEF1O43149 2961 aa7.46□□□□□ -1.21
PRPF40B-214ENST00000551320 HEPACAM2A8MVW5 462 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 LACTBL1A8MY62 500 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ESPNB1AK53 854 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ECI2O75521 394 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ATF2P15336 505 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 NMT1P30419 496 aaKnown RBP7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 GPR15P49685 360 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 YARSP54577 528 aaKnown RBP7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 RAB15P59190 212 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 MRPL58Q14197 206 aaKnown RBP7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ARSHQ5FYA8 562 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 SDHAF4Q5VUM1 108 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 SLC8B1Q6J4K2 584 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ZNF852Q6ZMS4 543 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 C1orf186Q6ZWK4 172 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ERMP1Q7Z2K6 904 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 FAM177A1Q8N128 213 aaPredicted RBP7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 PLPP7Q8NBV4 271 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ZSWIM2Q8NEG5 633 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 FBXO18Q8NFZ0 1043 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ERMNQ8TAM6 284 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 GIPC2Q8TF65 315 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 KIFAP3Q92845 792 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ASB16Q96NS5 453 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 TRMT61BQ9BVS5 477 aaKnown RBP7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ZFP14Q9HCL3 533 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 RXFP3Q9NSD7 469 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 DLL3Q9NYJ7 618 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 GTSE1Q9NYZ3 720 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ARHGAP28Q9P2N2 729 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 LIMCH1Q9UPQ0 1083 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 BACE2Q9Y5Z0 518 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 AKAP13Q12802 2813 aa7.46□□□□□ -1.22
PRPF40B-214ENST00000551320 ANK1P16157 1881 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ARHGEF37A1IGU5 675 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 VWA3AA6NCI4 1184 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ANKRD63C9JTQ0 380 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 TMEM189-UBE2V1I3L0A0 370 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 EPB41L2O43491 1005 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 HCRTO43612 131 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 EXTL3O43909 919 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 PRAMEF12O95522 483 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 MAPTP10636 758 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 TDGF1P13385 188 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 PROZP22891 400 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 HOXA9P31269 272 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 EFNA5P52803 228 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ANAPC15P60006 121 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 PRKCQQ04759 706 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ELAVL2Q12926 359 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 DMP1Q13316 513 aaPredicted RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 PON2Q15165 354 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 PPP2R5AQ15172 486 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ENOX2Q16206 610 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 UVSSAQ2YD98 709 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 XKR4Q5GH76 650 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 TRIM68Q6AZZ1 485 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ZC3H14Q6PJT7 736 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 MPZL3Q6UWV2 235 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 GAREM2Q75VX8 874 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 MAP4K3Q8IVH8 894 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 TCEAL8Q8IYN2 117 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 IGSF22Q8N9C0 903 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 FAM184AQ8NB25 1140 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ZBTB44Q8NCP5 570 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 TMEM161BQ8NDZ6 487 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 RIN3Q8TB24 985 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 FAM3CQ92520 227 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 CLDN23Q96B33 292 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ELSPBP1Q96BH3 223 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 BICD1Q96G01 975 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 SUSD3Q96L08 255 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 LRRC3Q9BY71 257 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 MRPL4Q9BYD3 311 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 FOXP1Q9H334 677 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms