RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 KCTD17Q8N5Z5 321 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 ATRIPQ8WXE1 791 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 CLIC6Q96NY7 704 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 FGFBP2Q9BYJ0 223 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 SMG9Q9H0W8 520 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 IL21Q9HBE4 155 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 ZSCAN32Q9NX65 697 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 GTSE1Q9NYZ3 720 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 PCDHGA2Q9Y5H1 932 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 PTPRDP23468 1912 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 MYMKA6NI61 221 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 H0YCG3 227 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 NCAM2O15394 837 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 PPP1R37O75864 691 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 KRT18P05783 430 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 GABRR2P28476 465 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 DDIT3P35638 169 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 MAGEA9P43362 315 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 ALDH1A3P47895 512 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 EPHB3P54753 998 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 CYP4F8P98187 520 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 FOXK2Q01167 660 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 TNK2Q07912 1038 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 SRSF5Q13243 272 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 MYBPC2Q14324 1141 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 RSPO4Q2I0M5 234 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 GPR158Q5T848 1215 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 WSCD1Q658N2 575 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 Q6ZS52 159 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 GIPC2Q8TF65 315 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 DEPDC1BQ8WUY9 529 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 LARP4BQ92615 738 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 PSMG2Q969U7 264 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 EPC1Q9H2F5 836 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 PARD6AQ9NPB6 346 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 TRPV5Q9NQA5 729 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 TMLHEQ9NVH6 421 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 DLL3Q9NYJ7 618 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 TBC1D7Q9P0N9 293 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 AGO2Q9UKV8 859 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 SMG5Q9UPR3 1016 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 MRPS17Q9Y2R5 130 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 KIAA1549LQ6ZVL6 1849 aa12.51□□□□□ -0.41
PRPF40B-212ENST00000551111 TPRP12270 2363 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 A0A087X0B3 334 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 MAN2B1O00754 1011 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 CYB561D2O14569 222 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 CYP11A1P05108 521 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 ODC1P11926 461 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 GPR15P49685 360 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 CASP5P51878 434 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 FCHO2Q0JRZ9 810 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 SDHAF4Q5VUM1 108 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 ZNF720Q7Z2F6 126 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 DGLUCYQ7Z3D6 616 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 TMEM150AQ86TG1 271 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 LEMD2Q8NC56 503 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 RIN3Q8TB24 985 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 DNAJC19Q96DA6 116 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 DPP3Q9NY33 737 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 NCDNQ9UBB6 729 aa12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 FBXO2Q9UK22 296 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 HELZP42694 1942 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-212ENST00000551111 VPS37CA5D8V6 355 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 CHADO15335 359 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 SLC26A4O43511 780 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 HRO43593 1189 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 HCRTO43612 131 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 CTHP32929 405 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 CEBPZQ03701 1054 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 PLD1Q13393 1074 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 KYAT1Q16773 422 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 MGAT5BQ3V5L5 792 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 ARMCX5Q6P1M9 558 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 PKN3Q6P5Z2 889 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 RASSF8Q8NHQ8 419 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 CHFRQ96EP1 664 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 SAAL1Q96ER3 474 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 PANK2Q9BZ23 570 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 ST6GALNAC4Q9H4F1 302 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 POLR3BQ9NW08 1133 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 CCL26Q9Y258 94 aa12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 CNOT1A5YKK6 2376 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-212ENST00000551111 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms