RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SURF6O75683 361 aaKnown RBP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 COMTP21964 271 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 RPS19P39019 145 aaKnown RBP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 RBM5P52756 815 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 RRP1P56182 461 aaKnown RBP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 ADCY1Q08828 1119 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 DGKDQ16760 1214 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 SPDYAQ5MJ70 313 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 KLHDC10Q6PID8 442 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 Q6ZSN1 163 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 MIGA2Q7L4E1 593 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 POLNQ7Z5Q5 900 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 ANKRD13AQ8IZ07 590 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 OR5AN1Q8NGI8 311 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 CHTF18Q8WVB6 975 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 ADOQ96SZ5 270 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 TARS2Q9BW92 718 aaKnown RBP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 OSBPL5Q9H0X9 879 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 THG1LQ9NWX6 298 aaKnown RBP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 KCMF1Q9P0J7 381 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 EYSQ5T1H1 3165 aa5.9□□□□□ -1.47
SCAF11-214ENST00000550893 CDH23Q9H251 3354 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 SLC26A4O43511 780 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 GUCY1A2P33402 732 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 RGS19P49795 217 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 ATP2C1P98194 919 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-214ENST00000550893 GABPAQ06546 454 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 FOXL1Q12952 345 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 PPIL2Q13356 520 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 TNFAIP1Q13829 316 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 ACAP1Q15027 740 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 TSHZ3Q63HK5 1081 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 ARMC9Q7Z3E5 817 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 KIAA0907Q7Z7F0 614 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-214ENST00000550893 FTSJ3Q8IY81 847 aaKnown RBP5.89□□□□□ -1.47
SCAF11-214ENST00000550893 NEUROD6Q96NK8 337 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 MYL10Q9BUA6 226 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 ZMAT4Q9H898 229 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 AGO3Q9H9G7 860 aaKnown RBP5.89□□□□□ -1.47
SCAF11-214ENST00000550893 MSL2Q9HCI7 577 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 DDX19BQ9UMR2 479 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 MCM3APO60318 1980 aa5.89□□□□□ -1.47
SCAF11-214ENST00000550893 C2orf78A6NCI8 922 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 MANSC4A6NHS7 340 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 TGM5O43548 720 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 H2AFYO75367 372 aaKnown RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 PRPF6O94906 941 aaKnown RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 ACO1P21399 889 aaKnown RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 STAT3P40763 770 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 BCAR1P56945 870 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 PRKD1Q15139 912 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 SEPT7Q16181 437 aaKnown RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 TREML2Q5T2D2 321 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 KANSL1Q7Z3B3 1105 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 AACSQ86V21 672 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 PHYKPLQ8IUZ5 450 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 EFHBQ8N7U6 833 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 C7orf31Q8N865 590 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 SHCBP1Q8NEM2 672 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 EDAQ92838 391 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 NKD2Q969F2 451 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 GFM2Q969S9 779 aaKnown RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 NELFAQ9H3P2 528 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 POFUT1Q9H488 388 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 DCTPP1Q9H773 170 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 AATFQ9NY61 560 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 PLA2G3Q9NZ20 509 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 ABCF2Q9UG63 623 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 PLAAQ9Y263 795 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 AFG3L2Q9Y4W6 797 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 RBM8AQ9Y5S9 174 aaKnown RBP5.88□□□□□ -1.47
SCAF11-214ENST00000550893 LTBP2Q14767 1821 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 REV3LO60673 3130 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 COL6A3P12111 3177 aa5.88□□□□□ -1.47
SCAF11-214ENST00000550893 CCL15-CCL14A0A0B4J2E2 113 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 PMS2P1A4D2B8 440 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 APOL3O95236 402 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 UQCRFS1P1P0C7P4 283 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 CYP2D6P10635 497 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 SHMT1P34896 483 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 MSX2P35548 267 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 ADCY7P51828 1080 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 SESN2P58004 480 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 SMAD3P84022 425 aaKnown RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 ZXDAP98168 799 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 ADCY2Q08462 1091 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 G3BP1Q13283 466 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 PICALMQ13492 652 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 GRM7Q14831 915 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 CCL15Q16663 113 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 SUPT20HL1Q3ZLR7 823 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 KIAA1755Q5JYT7 1200 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 C17orf99Q6UX52 265 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 MAMDC4Q6UXC1 1216 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 UNQ6494/PRO21346Q6UXR6 183 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 BMP8AQ7Z5Y6 402 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 CTU1Q7Z7A3 348 aaKnown RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 ERO1BQ86YB8 467 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms