RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SPATA33Q96N06 139 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 ADM5C9JUS6 153 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PLA2G6O60733 806 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 IRX4P78413 519 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 OGDHQ02218 1023 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 CLUL1Q15846 466 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PKN2Q16513 984 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PPP6R3Q5H9R7 873 aaPredicted RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 FKBP1CQ5VVH2 108 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 SESTD1Q86VW0 696 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 SULF1Q8IWU6 871 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 FAM71DQ8N9W8 422 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 KCTD6Q8NC69 237 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 JOSD2Q8TAC2 188 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 KCNV2Q8TDN2 545 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 ATXN2LQ8WWM7 1075 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PGM2Q96G03 612 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 HEXIM2Q96MH2 286 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 LRRC19Q9H756 370 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 A8MUI8 341 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PSMD6Q15008 389 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 HHATQ5VTY9 493 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 SPATS2Q86XZ4 545 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 ZBTB8OSQ8IWT0 167 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PARP9Q8IXQ6 854 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 TMEM35BQ8NCS4 154 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 SLC17A8Q8NDX2 589 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 VTI1AQ96AJ9 217 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 CLMNQ96JQ2 1002 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PORCNQ9H237 461 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 NGRNQ9NPE2 291 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 METTL5Q9NRN9 209 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 KRT3P12035 628 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 GBP2P32456 591 aaPredicted RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 DENND1BQ6P3S1 775 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 MON1BQ7L1V2 547 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 PIH1D1Q9NWS0 290 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 BTBD7Q9P203 1132 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 COQ4Q9Y3A0 265 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 CSADQ9Y600 493 aa14.43□□□□□ -0.1
PRPF40B-209ENST00000548825 VTNP04004 478 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 MMRN1Q13201 1228 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 DUOXA2Q1HG44 320 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 NPNTQ6UXI9 565 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 PALM2Q8IXS6 379 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 FUKQ8N0W3 1084 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 GIMAP7Q8NHV1 300 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 ACTL9Q8TC94 416 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 TXLNGYQ9BZA5 131 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 MIS12Q9H081 205 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 PDGFCQ9NRA1 345 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 FAM49BQ9NUQ9 324 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 SYNPO2Q9UMS6 1093 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 A0A1W2PPM1 405 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 M0QYV0 167 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 DDNO94850 711 aaPredicted RBP14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 SUN1O94901 812 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 TJP3O95049 919 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 TNNC2P02585 160 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 YWHAGP61981 247 aaKnown RBP eCLIP14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 RAB6CQ53S08 254 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 SH3PXD2AQ5TCZ1 1133 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 SLFN12LQ6IEE8 588 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 OR6B2Q6IFH4 312 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 EIF1ADQ8N9N8 165 aaKnown RBP14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 RAB6CQ9H0N0 254 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 HMGXB4Q9UGU5 601 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 CHMP2BQ9UQN3 213 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 NRXN2Q9P2S2 1712 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 PDE4DIPQ5VU43 2346 aa14.42□□□□□ -0.1
PRPF40B-209ENST00000548825 H0Y3Z8 333 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 H7C0C1 242 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 ITGB3P05106 788 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 ATP5OP48047 213 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 LAMTOR4Q0VGL1 99 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 VGLL4Q14135 290 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 GLRA4Q5JXX5 417 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 TRMT10CQ7L0Y3 403 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 PYROXD1Q8WU10 500 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 TMEM237Q96Q45 408 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 MAK16Q9BXY0 300 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 KLHL14Q9P2G3 628 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 TPX2Q9ULW0 747 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 AGAP1Q9UPQ3 857 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 MRPL42Q9Y6G3 142 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 ARIH2O95376 493 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 GDF10P55107 478 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 OTUD4Q01804 1114 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 CENPCQ03188 943 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 RNASELQ05823 741 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 FAM102AQ5T9C2 384 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 ENOSF1Q7L5Y1 443 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 TRIM11Q96F44 468 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 ZNF317Q96PQ6 595 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms