RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 VPS41P49754 854 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 TTLL4Q14679 1199 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 TMEM132AQ24JP5 1023 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 C6orf118Q5T5N4 469 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 DNAJC24Q6P3W2 148 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 B4GALNT4Q76KP1 1039 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 TRMT10CQ7L0Y3 403 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 ANKRD36BP1Q96IX9 119 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 FAM107BQ9H098 131 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 EFCC1Q9HA90 598 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 PCDHGC3Q9UN70 934 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 CSDE1O75534 798 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 C22orf31O95567 290 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 KRT10P13645 584 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 GJA5P36382 358 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 IGBP1P78318 339 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 NFX1Q12986 1120 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 PPP1R15BQ5SWA1 713 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 CYP4A22Q5TCH4 519 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 ZNF518BQ9C0D4 1074 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 ADAM7Q9H2U9 754 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 CNOT10Q9H9A5 744 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 IFT122Q9HBG6 1241 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 NXF1Q9UBU9 619 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 TNFSF13BQ9Y275 285 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 IVNS1ABPQ9Y6Y0 642 aa19.63■□□□□ 0.73
PRPF40B-208ENST00000548436 GPR25O00155 361 aa19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 ATF2P15336 505 aa19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 EIF4BP23588 611 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 ADCY8P40145 1251 aa19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 RAP1GAPP47736 663 aa19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 SCLT1Q96NL6 688 aa19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 SLITRK1Q96PX8 696 aa19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 SIX4Q9UIU6 781 aa19.62■□□□□ 0.73
PRPF40B-208ENST00000548436 RASGRF2O14827 1237 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 MEFVO15553 781 aaPredicted RBP19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 ACSL3O95573 720 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 MMP13P45452 471 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 ARHGAP1Q07960 439 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 AUHQ13825 339 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 TNFAIP8L3Q5GJ75 292 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 TXNRD3NBQ6F5E7 133 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 DCUN1D2Q6PH85 259 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 MFSD7Q6UXD7 560 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 ARMCX2Q7L311 632 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 PRUNE1Q86TP1 453 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 ERICH1Q86X53 443 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 RCOR2Q8IZ40 523 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 PWWP2AQ96N64 755 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 TRAIPQ9BWF2 469 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 RPF1Q9H9Y2 349 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 DNAJC17Q9NVM6 304 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 ERAP1Q9NZ08 941 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 ANAPC5Q9UJX4 755 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 ASAP2O43150 1006 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 AGTP01019 485 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 NFICP08651 508 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 KRT19P08727 400 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 CYP2C8P10632 490 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 INSRRP14616 1297 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 KAZNQ674X7 775 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 CROCCP2Q86T23 111 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 RASSF4Q9H2L5 321 aa19.61■□□□□ 0.73
PRPF40B-208ENST00000548436 KRT1P04264 644 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 MAGEA9P43362 315 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 CDH8P55286 799 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 QPCTQ16769 361 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 C1orf127Q8N9H9 656 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 RBM41Q96IZ5 413 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 PPP1R16BQ96T49 567 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 NFKBIZQ9BYH8 718 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 SDCBP2Q9H190 292 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 TJP2Q9UDY2 1190 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 CYTH4Q9UIA0 394 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 PLXNB2O15031 1838 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 ASB14A6NK59 587 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 LACTBL1A8MY62 500 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 IL18RAPO95256 599 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 ITGBL1O95965 494 aaPredicted RBP19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 CHN1P15882 459 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 KLRC2P26717 231 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 LACTBP83111 547 aaPredicted RBP19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 CAV1Q03135 178 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 LONRF1Q17RB8 773 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 ZFYVE27Q5T4F4 411 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 ERMARDQ5T6L9 678 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 ZNF365Q70YC5 407 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 C3orf20Q8ND61 904 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 CENPTQ96BT3 561 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 ACSF2Q96CM8 615 aaPredicted RBP19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 SELENOSQ9BQE4 189 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 BCO2Q9BYV7 579 aa19.6■□□□□ 0.73
PRPF40B-208ENST00000548436 LGALS2P05162 132 aa19.59■□□□□ 0.73
PRPF40B-208ENST00000548436 ATF7P17544 494 aaPredicted RBP19.59■□□□□ 0.73
PRPF40B-208ENST00000548436 ORC1Q13415 861 aa19.59■□□□□ 0.73
PRPF40B-208ENST00000548436 AMHR2Q16671 573 aa19.59■□□□□ 0.73
PRPF40B-208ENST00000548436 WDR72Q3MJ13 1102 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms