RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FAM84AQ96KN4 292 aa18.52■□□□□ 0.56
SFSWAP-205ENST00000537164 TMEM209Q96SK2 561 aa18.52■□□□□ 0.56
SFSWAP-205ENST00000537164 SMOC2Q9H3U7 446 aa18.52■□□□□ 0.56
SFSWAP-205ENST00000537164 CEP72Q9P209 647 aa18.52■□□□□ 0.56
SFSWAP-205ENST00000537164 YIPF1Q9Y548 306 aa18.52■□□□□ 0.56
SFSWAP-205ENST00000537164 TNNC2P02585 160 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 CYP2J2P51589 502 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 TWF1Q12792 350 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 DUSP4Q13115 394 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 PLD1Q13393 1074 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 SNW1Q13573 536 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 SLC5A9Q2M3M2 681 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 LMBRD2Q68DH5 695 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 DPH6Q7L8W6 267 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 NPAS3Q8IXF0 933 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 PDCL2Q8N4E4 241 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 FBXL6Q8N531 539 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 RDH13Q8NBN7 331 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 LEMD2Q8NC56 503 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 ENGASEQ8NFI3 743 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 C2orf15Q8WU43 125 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 CGRRF1Q99675 332 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 KCNH6Q9H252 994 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 GDE1Q9NZC3 331 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 L1RE1Q9UN81 338 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 MRPS23Q9Y3D9 190 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 HCN4Q9Y3Q4 1203 aa18.51■□□□□ 0.55
SFSWAP-205ENST00000537164 ZNF197O14709 1029 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 HUS1O60921 280 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 KIF20AO95235 890 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 CLDN10P78369 228 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 MYO1EQ12965 1108 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 TRAPPC11Q7Z392 1133 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 ELMOD1Q8N336 334 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 TOP6BLQ8N6T0 577 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 ATAD1Q8NBU5 361 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 RSAD2Q8WXG1 361 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 CCDC47Q96A33 483 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 CCDC34Q96HJ3 373 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 ZNF512Q96ME7 567 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 PGLYRP2Q96PD5 576 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 FNBP1Q96RU3 617 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 ACBD6Q9BR61 282 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 CORO1BQ9BR76 489 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 DNAJC25Q9H1X3 360 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 RAPGEFL1Q9UHV5 662 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 CIZ1Q9ULV3 898 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 TRAF3IP3Q9Y228 551 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 ASB3Q9Y575 518 aa18.5■□□□□ 0.55
SFSWAP-205ENST00000537164 GABRDO14764 452 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 EXOC3O60645 756 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 KRT19P08727 400 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 NFIL3Q16649 462 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 SLC39A12Q504Y0 691 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 POTEHQ6S545 545 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 MTSS1LQ765P7 747 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 LRRTM3Q86VH5 581 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 GUF1Q8N442 669 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 PARD3BQ8TEW8 1205 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 FGF14Q92915 247 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 HPDLQ96IR7 371 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 LRRC3Q9BY71 257 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 SNX9Q9Y5X1 595 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 NUMBLQ9Y6R0 609 aa18.49■□□□□ 0.55
SFSWAP-205ENST00000537164 STAU1O95793 577 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 DLATP10515 647 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 SRFP11831 508 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 TNNI1P19237 187 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 CCR2P41597 374 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 ALDH1A3P47895 512 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 LHX1P48742 406 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 TUFMP49411 452 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 FAM160A1Q05DH4 1040 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 BFSP1Q12934 665 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 SOWAHAQ2M3V2 549 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 PARM1Q6UWI2 310 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 DCP1BQ8IZD4 617 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 SPPL2BQ8TCT7 592 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 ZNF516Q92618 1163 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 TIGD1Q96MW7 591 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 WNT16Q9UBV4 365 aa18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 R3HCC1Q9Y3T6 440 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-205ENST00000537164 GOLGA6L4A6NEF3 574 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 MAPK13O15264 365 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 NARSO43776 548 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 MOSPD3O75425 235 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 CST3P01034 146 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 NR3C1P04150 777 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 FAM163BP0C2L3 166 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 CEBPBP17676 345 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 AP3M2P53677 418 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 EPHB3P54753 998 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 CYP4A22Q5TCH4 519 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 PDZD4Q76G19 769 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 TMC8Q8IU68 726 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 TTC9BQ8N6N2 239 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 SPATA20Q8TB22 786 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 PLEKHO2Q8TD55 490 aa18.47■□□□□ 0.55
SFSWAP-205ENST00000537164 PSMG2Q969U7 264 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms