RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 HDDC3Q8N4P3 179 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 CNOT6LQ96LI5 555 aaKnown RBP19.12■□□□□ 0.65
PVT1-220ENST00000524165 TPSD1Q9BZJ3 242 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 CRISPLD1Q9H336 500 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 EBF3Q9H4W6 596 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 ZMYM5Q9UJ78 669 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 TBX20Q9UMR3 447 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 PCDHB8Q9UN66 801 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 OAZ2O95190 189 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 BAG4O95429 457 aaKnown RBP19.11■□□□□ 0.65
PVT1-220ENST00000524165 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
PVT1-220ENST00000524165 MCM4P33991 863 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 CCNI2Q6ZMN8 369 aaPredicted RBP19.11■□□□□ 0.65
PVT1-220ENST00000524165 ITIH5Q86UX2 942 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 POTEDQ86YR6 584 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 FBXL16Q8N461 479 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 PIGOQ8TEQ8 1089 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 ADAMTS14Q8WXS8 1223 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 ZMAT2Q96NC0 199 aaKnown RBP19.11■□□□□ 0.65
PVT1-220ENST00000524165 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 PGLYRP2Q96PD5 576 aa19.11■□□□□ 0.65
PVT1-220ENST00000524165 CCDC94Q9BW85 323 aaPredicted RBP19.11■□□□□ 0.65
PVT1-220ENST00000524165 PTPRBP23467 1997 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 CEP192Q8TEP8 1941 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 KCNE1P15382 129 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 LIG1P18858 919 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 GRM5P41594 1212 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 NAMPTP43490 491 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 YWHAHQ04917 246 aaPredicted RBP19.1■□□□□ 0.65
PVT1-220ENST00000524165 GPR17Q13304 367 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 ATF7IP2Q5U623 682 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 DIEXFQ68CQ4 756 aaKnown RBP19.1■□□□□ 0.65
PVT1-220ENST00000524165 TRIM68Q6AZZ1 485 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 CENPPQ6IPU0 288 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 LPCAT2Q7L5N7 544 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 CCDC26Q8TAB7 109 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 BSNDQ8WZ55 320 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 EZH1Q92800 747 aaPredicted RBP19.1■□□□□ 0.65
PVT1-220ENST00000524165 SMG9Q9H0W8 520 aaKnown RBP19.1■□□□□ 0.65
PVT1-220ENST00000524165 RAXQ9Y2V3 346 aa19.1■□□□□ 0.65
PVT1-220ENST00000524165 TK2O00142 265 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 CDC25CP30307 473 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 HOXD12P35452 270 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 ATXN3P54252 364 aaPredicted RBP19.09■□□□□ 0.65
PVT1-220ENST00000524165 CYP4F8P98187 520 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 CMTM8Q8IZV2 173 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 DEPTORQ8TB45 409 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 SLC46A2Q9BY10 475 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 TMEM74BQ9NUR3 256 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 HSFX1Q9UBD0 423 aa19.09■□□□□ 0.65
PVT1-220ENST00000524165 MBD1Q9UIS9 605 aaPredicted RBP19.09■□□□□ 0.65
PVT1-220ENST00000524165 PCDH15Q96QU1 1955 aa19.08■□□□□ 0.65
PVT1-220ENST00000524165 OR6C75A6NL08 312 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 DEXIO95424 95 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 OR4Q2P0C623 313 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 ATP2B1P20020 1258 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 GJA4P35212 333 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 EFNA5P52803 228 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 SSRP1Q08945 709 aaKnown RBP19.08■□□□□ 0.64
PVT1-220ENST00000524165 SPDYCQ5MJ68 293 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 NT5DC1Q5TFE4 455 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 PEAR1Q5VY43 1037 aaPredicted RBP19.08■□□□□ 0.64
PVT1-220ENST00000524165 ANO7Q6IWH7 933 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 CEP120Q8N960 986 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 OLIG1Q8TAK6 271 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 MDM1Q8TC05 714 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 CD101Q93033 1021 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 GCNAQ96QF7 691 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 UBL7Q96S82 380 aaPredicted RBP19.08■□□□□ 0.64
PVT1-220ENST00000524165 AGXT2Q9BYV1 514 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 KIF9Q9HAQ2 790 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 CNTN3Q9P232 1028 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 DKK4Q9UBT3 224 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 PCDHA12Q9UN75 941 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 TNFSF13BQ9Y275 285 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 SLC27A5Q9Y2P5 690 aa19.08■□□□□ 0.64
PVT1-220ENST00000524165 OBSL1O75147 1896 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 CFAP46Q8IYW2 2715 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 M0QZQ0 153 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 OPHN1O60890 802 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 CPA1P15085 419 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 ARSAP15289 507 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 PSMD2Q13200 908 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 PPP2R5AQ15172 486 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 PDGFRLQ15198 375 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 NAIF1Q69YI7 327 aaPredicted RBP19.07■□□□□ 0.64
PVT1-220ENST00000524165 MDGA1Q8NFP4 955 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 C18orf25Q96B23 403 aaPredicted RBP19.07■□□□□ 0.64
PVT1-220ENST00000524165 IL21Q9HBE4 155 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 NCOA5Q9HCD5 579 aaKnown RBP19.07■□□□□ 0.64
PVT1-220ENST00000524165 SLC6A14Q9UN76 642 aa19.07■□□□□ 0.64
PVT1-220ENST00000524165 MTMR11A4FU01 709 aa19.06■□□□□ 0.64
PVT1-220ENST00000524165 CYSRT1A8MQ03 144 aa19.06■□□□□ 0.64
PVT1-220ENST00000524165 U2AF2P26368 475 aaKnown RBP eCLIP19.06■□□□□ 0.642e-7■■□□□ 11.9
PVT1-220ENST00000524165 AVPR1AP37288 418 aa19.06■□□□□ 0.64
PVT1-220ENST00000524165 P2RY2P41231 377 aa19.06■□□□□ 0.64
PVT1-220ENST00000524165 PTGER3P43115 390 aa19.06■□□□□ 0.64
PVT1-220ENST00000524165 CCT2P78371 535 aaKnown RBP19.06■□□□□ 0.64
PVT1-220ENST00000524165 TRIP6Q15654 476 aaKnown RBP19.06■□□□□ 0.64
PVT1-220ENST00000524165 LMBRD2Q68DH5 695 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms