RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 NSUN4Q96CB9 384 aaKnown RBP5.61□□□□□ -1.51
AP3B1-204ENST00000519295 ASB16Q96NS5 453 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 NEURL2Q9BR09 285 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 WACQ9BTA9 647 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 CALN1Q9BXU9 219 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 PARP2Q9UGN5 583 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 TMPRSS11EQ9UL52 423 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 GTF2A1LQ9UNN4 478 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 PFASO15067 1338 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 MYH6P13533 1939 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 ATP5J2-PTCD1G3V325 749 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 H3BUI4 141 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 IVLP07476 585 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 M6PRP20645 277 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 CYP3A5P20815 502 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 RENBPP51606 427 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 TMPRSS15P98073 1019 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 KCNAB2Q13303 367 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 ERV3-1Q14264 604 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 NFE2L1Q14494 772 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 ARHGAP29Q52LW3 1261 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 RPUSD3Q6P087 351 aaKnown RBP5.61□□□□□ -1.51
AP3B1-204ENST00000519295 CCDC62Q6P9F0 684 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 MEX3BQ6ZN04 569 aaKnown RBP5.61□□□□□ -1.51
AP3B1-204ENST00000519295 NEK8Q86SG6 692 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 SLC22A9Q8IVM8 553 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 LRRC47Q8N1G4 583 aaKnown RBP5.61□□□□□ -1.51
AP3B1-204ENST00000519295 PSD4Q8NDX1 1056 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 ADAMTS16Q8TE57 1224 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 RNF139Q8WU17 664 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 FAM227BQ96M60 508 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 CASD1Q96PB1 797 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 CLSTN3Q9BQT9 956 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 AIFM2Q9BRQ8 373 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 NDUFA13Q9P0J0 144 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 STRIP2Q9ULQ0 834 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 EDARQ9UNE0 448 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 TGDSO95455 350 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 VNN1O95497 513 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 ANXA1P04083 346 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 TARSP26639 723 aaKnown RBP5.61□□□□□ -1.51
AP3B1-204ENST00000519295 UBXN1Q04323 297 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 KIF22Q14807 665 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 LDHAL6AQ6ZMR3 332 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 CD99L2Q8TCZ2 262 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 SYTL5Q8TDW5 730 aaPredicted RBP5.61□□□□□ -1.51
AP3B1-204ENST00000519295 STARD8Q92502 1023 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 NUDCD1Q96RS6 583 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 KATNBL1Q9H079 304 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 SRA1Q9HD15 236 aaKnown RBP5.61□□□□□ -1.51
AP3B1-204ENST00000519295 RPTORQ8N122 1335 aa5.61□□□□□ -1.51
AP3B1-204ENST00000519295 DNAJC25-GNG10A0A024R161 153 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 KIAA0355O15063 1070 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 EYA4O95677 639 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 CHRNA1P02708 482 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 USP46P62068 366 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 CCDC153Q494R4 210 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 LRRC23Q53EV4 343 aaPredicted RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 MANEAQ5SRI9 462 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 SNRNP48Q6IEG0 339 aaKnown RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 TMEM214Q6NUQ4 689 aaKnown RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 CATSPERGQ6ZRH7 1159 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 TMPRSS9Q7Z410 1059 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 ANGPTL6Q8NI99 470 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 ZUFSPQ96AP4 578 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 SLC9A7Q96T83 725 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 USB1Q9BQ65 265 aaKnown RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 SNX25Q9H3E2 840 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 ZDHHC18Q9NUE0 388 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 MSRB2Q9Y3D2 182 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 PCDHB12Q9Y5F1 795 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 ITIH6Q6UXX5 1313 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 SRRM3A6NNA2 597 aaPredicted RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 RGS13O14921 159 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 NPPAP01160 153 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 CYBAP13498 195 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 HSPA4P34932 840 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 FCGRTP55899 365 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 SLC14A1Q13336 389 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 TTLL12Q14166 644 aaPredicted RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 PKDCCQ504Y2 493 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 ANO7Q6IWH7 933 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 LRSAM1Q6UWE0 723 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 Q6ZNX1 250 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 CCDC84Q86UT8 332 aaPredicted RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 SGMS1Q86VZ5 419 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 VPS37DQ86XT2 251 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 TOR1AIP2Q8NFQ8 470 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 MYCBPAPQ8TBZ2 947 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 DQX1Q8TE96 717 aaKnown RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 REXO5Q96IC2 774 aaKnown RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 DHRS9Q9BPW9 319 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 CSRNP2Q9H175 543 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 INTS7Q9NVH2 962 aaKnown RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 ZNHIT2Q9UHR6 403 aa5.6□□□□□ -1.51
AP3B1-204ENST00000519295 FBXO2Q9UK22 296 aaPredicted RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 CNOT6Q9ULM6 557 aaKnown RBP5.6□□□□□ -1.51
AP3B1-204ENST00000519295 MRPL11Q9Y3B7 192 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms