RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 RNF149Q8NC42 400 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 TMEM143Q96AN5 459 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 DCUN1D1Q96GG9 259 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 METTL5Q9NRN9 209 aaKnown RBP17.42■□□□□ 0.38
MTCL1-205ENST00000517570 SPAG6O75602 509 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 ATP6V1G2O95670 118 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 IMPDH2P12268 514 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 NCOA4Q13772 614 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 KLHDC7AQ5VTJ3 777 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 ZNF560Q96MR9 790 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 AGAP1Q9UPQ3 857 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 PCDHA10Q9Y5I2 948 aa17.42■□□□□ 0.38
MTCL1-205ENST00000517570 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
MTCL1-205ENST00000517570 GPSM2P81274 684 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 AASDHQ4L235 1098 aaPredicted RBP17.41■□□□□ 0.38
MTCL1-205ENST00000517570 CYP4A22Q5TCH4 519 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 BTN2A2Q8WVV5 523 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 MASTLQ96GX5 879 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 C10orf88Q9H8K7 445 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 NSMCE4AQ9NXX6 385 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 USE1Q9NZ43 259 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 FBXO40Q9UH90 709 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 TNIP2Q8NFZ5 429 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 TJP2Q9UDY2 1190 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 ARID3BQ8IVW6 561 aaPredicted RBP17.41■□□□□ 0.38
MTCL1-205ENST00000517570 APLFQ8IW19 511 aaPredicted RBP17.41■□□□□ 0.38
MTCL1-205ENST00000517570 C3orf20Q8ND61 904 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 ZNF263O14978 683 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 KYAT1Q16773 422 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 UGP2Q16851 508 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 LUZP2Q86TE4 346 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 RIN3Q8TB24 985 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 FOXP3Q9BZS1 431 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 SHCBP1Q8NEM2 672 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 HES6Q96HZ4 224 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 RNPEPQ9H4A4 650 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 PKP3Q9Y446 797 aa17.41■□□□□ 0.38
MTCL1-205ENST00000517570 NDUFS3O75489 264 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 NLRP9Q7RTR0 991 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 SETD3Q86TU7 594 aaPredicted RBP17.4■□□□□ 0.38
MTCL1-205ENST00000517570 WRNIP1Q96S55 665 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 TRIM62Q9BVG3 475 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 THAP2Q9H0W7 228 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 PNMA3Q9UL41 463 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 MAFGO15525 162 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 NNMTP40261 264 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 EPC2Q52LR7 807 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 SGO1Q5FBB7 561 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DDI1Q8WTU0 396 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 WDR35Q9P2L0 1181 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DDX5P17844 614 aaKnown RBP17.4■□□□□ 0.38
MTCL1-205ENST00000517570 SCUBE1Q8IWY4 988 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 APPL2Q8NEU8 664 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 ARHGEF1Q92888 912 aaKnown RBP17.4■□□□□ 0.38
MTCL1-205ENST00000517570 TNIP3Q96KP6 325 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 JPH1Q9HDC5 661 aaPredicted RBP17.4■□□□□ 0.38
MTCL1-205ENST00000517570 FAM153AQ9UHL3 310 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 SLC39A10Q9ULF5 831 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 A0A1B0GW55 424 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 H3BQF6 201 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DUX4L2P0CJ85 424 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DUX4L3P0CJ86 424 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DUX4L4P0CJ87 422 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DUX4L5P0CJ88 424 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DUX4L6P0CJ89 424 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DUX4L7P0CJ90 424 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 TMED8Q6PL24 325 aaPredicted RBP17.4■□□□□ 0.38
MTCL1-205ENST00000517570 MICU2Q8IYU8 434 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 NMD3Q96D46 503 aaKnown RBP17.4■□□□□ 0.38
MTCL1-205ENST00000517570 SLC10A4Q96EP9 437 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 TIPINQ9BVW5 301 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 H2AFY2Q9P0M6 372 aaPredicted RBP17.4■□□□□ 0.38
MTCL1-205ENST00000517570 DUX4Q9UBX2 424 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 TRIM49D1C9J1S8 452 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 STRNO43815 780 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 GSNP06396 782 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 CPB1P15086 417 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 KCNMA1Q12791 1236 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 PI4K2AQ9BTU6 479 aa17.4■□□□□ 0.38
MTCL1-205ENST00000517570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.39■□□□□ 0.37
MTCL1-205ENST00000517570 C21orf2O43822 256 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 SMNDC1O75940 238 aaKnown RBP eCLIP17.39■□□□□ 0.37
MTCL1-205ENST00000517570 HIST1H2AGP0C0S8 130 aaPredicted RBP17.39■□□□□ 0.37
MTCL1-205ENST00000517570 HIST1H2ADP20671 130 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 SPATA2LQ8IUW3 424 aaPredicted RBP17.39■□□□□ 0.37
MTCL1-205ENST00000517570 HIST1H2AHQ96KK5 128 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 HIST1H2AJQ99878 128 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 H2AFJQ9BTM1 129 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 RNF103O00237 685 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 CST8O60676 142 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 PSMA4P25789 261 aaKnown RBP17.39■□□□□ 0.37
MTCL1-205ENST00000517570 EFNA5P52803 228 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 UBA3Q8TBC4 463 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 KRT35Q92764 455 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 HIC2Q96JB3 615 aa17.39■□□□□ 0.37
MTCL1-205ENST00000517570 USP42Q9H9J4 1324 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms