RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 ZSCAN16Q9H4T2 348 aaPredicted RBP5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 RIOX1Q9H6W3 641 aa5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 PIH1D3Q9NQM4 214 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 KCMF1Q9P0J7 381 aa5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 PTGFRNQ9P2B2 879 aa5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 ZNHIT2Q9UHR6 403 aa5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 MYH1P12882 1939 aa5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 ANKRD31Q8N7Z5 1873 aa5.07□□□□□ -1.6
UBE2D3-230ENST00000510599 LTBP1Q14766 1721 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 ZNF804BA4D1E1 1349 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 PDS5AQ29RF7 1337 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 PNPLA7Q6ZV29 1317 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 ZNF532Q9HCE3 1301 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 SALL1Q9NSC2 1324 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 UBA6A0AVT1 1052 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 DAPK3O43293 454 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 DHX16O60231 1041 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 IL12RB1P42701 662 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 ANTXR2P58335 489 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 CHRNDQ07001 517 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 CCDC173Q0VFZ6 552 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 DCAF17Q5H9S7 520 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 CCDC183Q5T5S1 534 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 SLFN12LQ6IEE8 588 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 CLEC14AQ86T13 490 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 VRK3Q8IV63 474 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 ANKRD18AQ8IVF6 992 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 MB21D2Q8IYB1 491 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 FAM43AQ8N2R8 423 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 GPR150Q8NGU9 434 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 ZNF764Q96H86 408 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 DYDC2Q96IM9 177 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 MAML3Q96JK9 1138 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 TCEANC2Q96MN5 208 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 STRBPQ96SI9 672 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 GNL3LQ9NVN8 582 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 NCDNQ9UBB6 729 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 CFAP45Q9UL16 551 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 CNPY2Q9Y2B0 182 aa5.06□□□□□ -1.6
UBE2D3-230ENST00000510599 NID2Q14112 1375 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 VPS37CA5D8V6 355 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 PRC1O43663 620 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 IDH1O75874 414 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 PDIA3P30101 505 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 NPEPPSP55786 919 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 TRDNQ13061 729 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 SPIDRQ14159 915 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 ARHGAP44Q17R89 818 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 C1QL3Q5VWW1 255 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 NAIF1Q69YI7 327 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 TTLL5Q6EMB2 1281 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 OTOP1Q7RTM1 612 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 BMP8AQ7Z5Y6 402 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 IGSF22Q8N9C0 903 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 FAM184AQ8NB25 1140 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 NSUN7Q8NE18 718 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 SLC7A14Q8TBB6 771 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 ST8SIA2Q92186 375 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 ANP32BQ92688 251 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 RPGRQ92834 1020 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 ANKRD2Q9GZV1 360 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 SIRPGQ9P1W8 387 aa5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 PPP1R1BQ9UD71 204 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 CCNL1Q9UK58 526 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 TRPC5Q9UL62 973 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-230ENST00000510599 DDX60LQ5H9U9 1706 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 SYCE3A1L190 88 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 GRID2IPA4D2P6 1211 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 ZAR1LA6NP61 321 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 H3BQV1 296 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 B3GALT2O43825 422 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 JAK2O60674 1132 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 KRT37O76014 449 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 RECQL4O94761 1208 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 CTDNEP1O95476 244 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 ZBTB48P10074 688 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 PCP11498 1178 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 LIFRP42702 1097 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 NT5C2P49902 561 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 KIF11P52732 1056 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 ATXN1P54253 815 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 RPS8P62241 208 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 RESTQ13127 1097 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 STK3Q13188 491 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 CAVIN4Q5BKX8 364 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 TTC38Q5R3I4 469 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 LRCH2Q5VUJ6 765 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 PRAMEF9Q5VWM5 478 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 TBC1D9BQ66K14 1250 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 APBB1IPQ7Z5R6 666 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 CMTM4Q8IZR5 234 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 MAGEB6Q8N7X4 407 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 SCLYQ96I15 445 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 FAM193BQ96PV7 902 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 PANK2Q9BZ23 570 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 NACAP1Q9BZK3 213 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 KRT23Q9C075 422 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 TSPY26PQ9H489 355 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 DNAI1Q9UI46 699 aa5.04□□□□□ -1.6
UBE2D3-230ENST00000510599 SORCS3Q9UPU3 1222 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms