RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ZNF764Q96H86 408 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 LRFN3Q9BTN0 628 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 DUSP26Q9BV47 211 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 KLK15Q9H2R5 256 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 GPR35Q9HC97 309 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 TCF7L1Q9HCS4 588 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 RLIMQ9NVW2 624 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 ASB6Q9NWX5 421 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 CFAP97Q9P2B7 532 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 NR2E3Q9Y5X4 410 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 LRRC3CA6NJW4 275 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 H3BUI4 141 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 M0QYG6 137 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 SLC16A6O15403 523 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 PROM1O43490 865 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 C1QL1O75973 258 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 FTH1P19P0C7X4 201 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 HDCP19113 662 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 PIN1Q13526 163 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 PLS1Q14651 629 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 TXNRD1Q16881 649 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 THEMIS2Q5TEJ8 643 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 KIAA0895LQ68EN5 471 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 PCSK9Q8NBP7 692 aaKnown RBP4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 PLBD2Q8NHP8 589 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 CAGE1Q8TC20 777 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 SLC9A6Q92581 669 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 HPS3Q969F9 1004 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 SLC35A4Q96G79 324 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 LRGUKQ96M69 825 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 SLC12A5Q9H2X9 1139 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 WDCPQ9H6R7 721 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 ARMT1Q9H993 441 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 GNL3LQ9NVN8 582 aaKnown RBP4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 PTGFRNQ9P2B2 879 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 NEU2Q9Y3R4 380 aa4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 ARHGEF17Q96PE2 2063 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 COL11A2P13942 1736 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P29-201ENST00000505659 A0A0B4J269 797 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 F5H697 171 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 AKAP10O43572 662 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 ARIH2O95376 493 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 PDHA1P08559 390 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 CT47B1P0C2W7 299 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 MYBP10242 640 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 AKAP5P24588 427 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 NDUFV1P49821 464 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 RAB27AP51159 221 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 IGBP1P78318 339 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 NKX6-1P78426 367 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 TUBB3Q13509 450 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 HLXQ14774 488 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 CCDC157Q569K6 752 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 IFIT1BQ5T764 474 aaKnown RBP4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 VPS53Q5VIR6 699 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 KAZNQ674X7 775 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 PPP1R32Q7Z5V6 425 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 USP37Q86T82 979 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 TPH2Q8IWU9 490 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 B3GALNT2Q8NCR0 500 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 FAM46DQ8NEK8 389 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 MAP3K14Q99558 947 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 CGRRF1Q99675 332 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 CNPPD1Q9BV87 410 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 TYW1Q9NV66 732 aaKnown RBP4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 PNPOQ9NVS9 261 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 STAP2Q9UGK3 403 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 PCDHA6Q9UN73 950 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 ST3GAL5Q9UNP4 418 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 ANKRD6Q9Y2G4 727 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 ADGRA2Q96PE1 1338 aa4.4□□□□□ -1.71
HMGB1P29-201ENST00000505659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 LINC00473A8K010 186 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 E7ENX8 843 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 MASP2O00187 686 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 MPPED1O15442 326 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 AP1G1O43747 822 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 DNAJB5O75953 348 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 CHEK2O96017 543 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 IGLV2-14P01704 120 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZNF37AP17032 561 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZNF134P52741 427 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 CACNA2D1P54289 1103 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 TAP2Q03519 686 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 ATAT1Q5SQI0 421 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 RBM20Q5T481 1227 aaKnown RBP4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 COL23A1Q86Y22 540 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 PPP1R35Q8TAP8 253 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 DIS3LQ8TF46 1054 aaKnown RBP4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 JPH3Q8WXH2 748 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 NUP88Q99567 741 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 KMT5AQ9NQR1 393 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 SEMA4GQ9NTN9 838 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZNF180Q9UJW8 692 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZDHHC8Q9ULC8 765 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 THRAP3Q9Y2W1 955 aaKnown RBP4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
HMGB1P29-201ENST00000505659 WDR27A2RRH5 827 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 DCLK1O15075 740 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms