RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MGAT1P26572 445 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 EEF1GP26641 437 aaKnown RBP7.2□□□□□ -1.26
VPS50-212ENST00000476413 ZRSR2Q15696 482 aaKnown RBP7.2□□□□□ -1.26
VPS50-212ENST00000476413 SLC44A4Q53GD3 710 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 ZFYVE27Q5T4F4 411 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 AGAP9Q5VTM2 703 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 FAM160B1Q5W0V3 765 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 NAIF1Q69YI7 327 aaPredicted RBP7.2□□□□□ -1.26
VPS50-212ENST00000476413 ZDHHC24Q6UX98 284 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 ATXN2LQ8WWM7 1075 aaKnown RBP7.2□□□□□ -1.26
VPS50-212ENST00000476413 EVI5LQ96CN4 794 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 C18orf8Q96DM3 657 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 PHACTR3Q96KR7 559 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 HERPUD2Q9BSE4 406 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 SERHLQ9NQF3 203 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 HESX1Q9UBX0 185 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 TMX2Q9Y320 296 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 A0A087WZ62 844 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 PRICKLE3O43900 615 aaPredicted RBP7.19□□□□□ -1.26
VPS50-212ENST00000476413 TXNP10599 105 aaKnown RBP7.19□□□□□ -1.26
VPS50-212ENST00000476413 TECP42680 631 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 CARSP49589 748 aaKnown RBP7.19□□□□□ -1.26
VPS50-212ENST00000476413 TMEM95Q3KNT9 176 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 CCDC174Q6PII3 467 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 CATSPERGQ6ZRH7 1159 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 LIMS2Q7Z4I7 341 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 POLNQ7Z5Q5 900 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 CFAP52Q8N1V2 620 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 MPP5Q8N3R9 675 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 MARS2Q96GW9 593 aaKnown RBP7.19□□□□□ -1.26
VPS50-212ENST00000476413 CNPPD1Q9BV87 410 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 STK33Q9BYT3 514 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 AS3MTQ9HBK9 375 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 HSFX1Q9UBD0 423 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 ZNF536O15090 1300 aa7.19□□□□□ -1.26
VPS50-212ENST00000476413 PATE3B3GLJ2 98 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 DCLK1O15075 740 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 ZSCAN22P10073 491 aaPredicted RBP7.18□□□□□ -1.26
VPS50-212ENST00000476413 NHLH2Q02577 135 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 GALNT1Q10472 559 aaPredicted RBP7.18□□□□□ -1.26
VPS50-212ENST00000476413 Q6ZRM9 215 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 RHOT2Q8IXI1 618 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 SYTL1Q8IYJ3 562 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 VGLL2Q8N8G2 317 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 ANKRD42Q8N9B4 389 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 FANCBQ8NB91 859 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 SPSB4Q96A44 273 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 MS4A7Q9GZW8 240 aaPredicted RBP7.18□□□□□ -1.26
VPS50-212ENST00000476413 CDYLQ9Y232 598 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 MAN2B2Q9Y2E5 1009 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 TBC1D30Q9Y2I9 924 aa7.18□□□□□ -1.26
VPS50-212ENST00000476413 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.18□□□□□ -1.26
VPS50-212ENST00000476413 MORC2Q9Y6X9 1032 aaPredicted RBP7.18□□□□□ -1.26
VPS50-212ENST00000476413 AREL1O15033 823 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 A1BGP04217 495 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 PDIA3P30101 505 aaKnown RBP7.17□□□□□ -1.26
VPS50-212ENST00000476413 VIPR2P41587 438 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 WNT3P56703 355 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 MXRA7P84157 204 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 RRAGBQ5VZM2 374 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 MAMDC4Q6UXC1 1216 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 SPOCD1Q6ZMY3 1216 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 RNF44Q7L0R7 432 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 BEND5Q7L4P6 421 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 TMPRSS9Q7Z410 1059 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 CIR1Q86X95 450 aaPredicted RBP7.17□□□□□ -1.26
VPS50-212ENST00000476413 GAS2L3Q86XJ1 694 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 ANKRD35Q8N283 1001 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 TXLNBQ8N3L3 684 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 ZNF808Q8N4W9 903 aaPredicted RBP7.17□□□□□ -1.26
VPS50-212ENST00000476413 CYP2W1Q8TAV3 490 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 ZNF566Q969W8 418 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 RBM15Q96T37 977 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS50-212ENST00000476413 MNTQ99583 582 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 MESP1Q9BRJ9 268 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 STK31Q9BXU1 1019 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 SIK2Q9H0K1 926 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 LUZP4Q9P127 313 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 CTTNBP2NLQ9P2B4 639 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 MID2Q9UJV3 735 aa7.17□□□□□ -1.26
VPS50-212ENST00000476413 GRXCR1A8MXD5 290 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 ZNF185O15231 689 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 THAP12O43422 761 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 VPS4BO75351 444 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 CHKAP35790 457 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 ALDH9A1P49189 494 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 SCNN1GP51170 649 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 STARD3Q14849 445 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 PUM3Q15397 648 aaKnown RBP7.16□□□□□ -1.26
VPS50-212ENST00000476413 Q8NA96 180 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 NSUN7Q8NE18 718 aaKnown RBP7.16□□□□□ -1.26
VPS50-212ENST00000476413 MYRIPQ8NFW9 859 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 Q8TCH9 128 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 ZNF483Q8TF39 744 aaPredicted RBP7.16□□□□□ -1.26
VPS50-212ENST00000476413 WWC2-AS2Q96NR7 200 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 ZNF212Q9UDV6 495 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 ITGB1BP2Q9UKP3 347 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 JAG2Q9Y219 1238 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 CHST2Q9Y4C5 530 aa7.16□□□□□ -1.26
VPS50-212ENST00000476413 CAPN14A8MX76 684 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms