RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ING5Q8WYH8 240 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 FGF13Q92913 245 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 HPDLQ96IR7 371 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 MFSD14AQ96MC6 490 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 RTP3Q9BQQ7 232 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 ZCWPW1Q9H0M4 648 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 L1RE1Q9UN81 338 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 DOCK8Q8NF50 2099 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 TECTAO75443 2155 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 CALUO43852 315 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-223ENST00000475146 ANP32AP39687 249 aaKnown RBP25.83■■□□□ 1.73
CPNE1-223ENST00000475146 PLD1Q13393 1074 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 TDGQ13569 410 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 SNW1Q13573 536 aaKnown RBP25.83■■□□□ 1.73
CPNE1-223ENST00000475146 HFE2Q6ZVN8 426 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 SLC9A9Q8IVB4 645 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 ENGASEQ8NFI3 743 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 RSAD2Q8WXG1 361 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 ZNF512Q96ME7 567 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-223ENST00000475146 CRISPLD1Q9H336 500 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 GDAP2Q9NXN4 497 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 SLC27A5Q9Y2P5 690 aa25.83■■□□□ 1.73
CPNE1-223ENST00000475146 ZFP37Q9Y6Q3 630 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-223ENST00000475146 CDR1P51861 262 aa25.82■■□□□ 1.72
CPNE1-223ENST00000475146 CEP135Q66GS9 1140 aa25.82■■□□□ 1.72
CPNE1-223ENST00000475146 CENPPQ6IPU0 288 aa25.82■■□□□ 1.72
CPNE1-223ENST00000475146 ST13P5Q8NFI4 369 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-223ENST00000475146 DMAC2Q9NW81 257 aa25.82■■□□□ 1.72
CPNE1-223ENST00000475146 ALDH1A3P47895 512 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 CASP4P49662 377 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 TSPY1Q01534 308 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 SLC5A9Q2M3M2 681 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 PDZD4Q76G19 769 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-223ENST00000475146 NPAS3Q8IXF0 933 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 DCP1BQ8IZD4 617 aaKnown RBP25.81■■□□□ 1.72
CPNE1-223ENST00000475146 ADGRF2Q8IZF7 708 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 TMEM86AQ8N2M4 240 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 GUF1Q8N442 669 aaKnown RBP25.81■■□□□ 1.72
CPNE1-223ENST00000475146 TTC9BQ8N6N2 239 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 TOP6BLQ8N6T0 577 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 RMND1Q9NWS8 449 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 CEP72Q9P209 647 aa25.81■■□□□ 1.72
CPNE1-223ENST00000475146 HOOK1Q9UJC3 728 aaKnown RBP25.81■■□□□ 1.72
CPNE1-223ENST00000475146 PHACTR2O75167 634 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 EPHB3P54753 998 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 MYL7Q01449 175 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 CYP4A22Q5TCH4 519 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 HS6ST3Q8IZP7 471 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 PLEKHO2Q8TD55 490 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 NXPE3Q969Y0 559 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 PBXIP1Q96AQ6 731 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 ASIC4Q96FT7 647 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 SEPT5Q99719 369 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-223ENST00000475146 GZF1Q9H116 711 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-223ENST00000475146 AVENQ9NQS1 362 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-223ENST00000475146 ASAH2Q9NR71 780 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 DDX43Q9NXZ2 648 aaKnown RBP25.8■■□□□ 1.72
CPNE1-223ENST00000475146 ABI2Q9NYB9 513 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-223ENST00000475146 TRAF3IP3Q9Y228 551 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 FRMD4BQ9Y2L6 1034 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 NOTCH4Q99466 2003 aa25.8■■□□□ 1.72
CPNE1-223ENST00000475146 ZNF197O14709 1029 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 SOAT2O75908 522 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 CLSTN1O94985 981 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 SMC2O95347 1197 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 MYL4P12829 197 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 CEBPBP17676 345 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 ACAT1P24752 427 aaKnown RBP25.79■■□□□ 1.72
CPNE1-223ENST00000475146 SMARCB1Q12824 385 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 BIRC3Q13489 604 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 TRPC3Q13507 836 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 HTR4Q13639 388 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 MGAT5BQ3V5L5 792 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 LRRTM3Q86VH5 581 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 SMYD4Q8IYR2 804 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-223ENST00000475146 TMEM174Q8WUU8 243 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 ZNF516Q92618 1163 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 TIGD1Q96MW7 591 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 CHMP5Q9NZZ3 219 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 RAPGEFL1Q9UHV5 662 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 DUSP12Q9UNI6 340 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 NUMBLQ9Y6R0 609 aa25.79■■□□□ 1.72
CPNE1-223ENST00000475146 LRRIQ3A6PVS8 624 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-223ENST00000475146 ANHXE9PGG2 379 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 NR2F2P24468 414 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 SOWAHAQ2M3V2 549 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 OSTM1Q86WC4 334 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 LEMD2Q8NC56 503 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 SPATA18Q8TC71 538 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 SPPL2BQ8TCT7 592 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 PARD3BQ8TEW8 1205 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 C2orf15Q8WU43 125 aaKnown RBP25.78■■□□□ 1.72
CPNE1-223ENST00000475146 ERCC4Q92889 916 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-223ENST00000475146 SMARCE1Q969G3 411 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 TCEAL4Q96EI5 215 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 MCRS1Q96EZ8 462 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 MMS19Q96T76 1030 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 HSFX1Q9UBD0 423 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 HCN4Q9Y3Q4 1203 aa25.78■■□□□ 1.72
CPNE1-223ENST00000475146 NARSO43776 548 aaKnown RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms