RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 HMGB2P26583 209 aaKnown RBP14.78□□□□□ -0.04
ABCF3-210ENST00000473311 SP4Q02446 784 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 PTP4A2Q12974 167 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 TMED1Q13445 227 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 BRDTQ58F21 947 aaPredicted RBP14.78□□□□□ -0.04
ABCF3-210ENST00000473311 ARHGEF16Q5VV41 709 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 KAZNQ674X7 775 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 TSHZ1Q6ZSZ6 1077 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 NTPCRQ9BSD7 190 aaKnown RBP14.78□□□□□ -0.04
ABCF3-210ENST00000473311 PITPNM3Q9BZ71 974 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 QTRT2Q9H974 415 aaKnown RBP14.78□□□□□ -0.04
ABCF3-210ENST00000473311 KLHL11Q9NVR0 708 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 DNAAF2Q9NVR5 837 aaKnown RBP14.78□□□□□ -0.04
ABCF3-210ENST00000473311 EXOC1LA0A1B0GW35 172 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 A8MUI8 341 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 TBC1D12O60347 775 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 GARTP22102 1010 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 DSG3P32926 999 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 IL9RQ01113 521 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 DEUP1Q05D60 604 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 MTFR1Q15390 333 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 NLRX1Q86UT6 975 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 SUPT20HQ8NEM7 779 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 OPTNQ96CV9 577 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 MRPL47Q9HD33 250 aaKnown RBP14.78□□□□□ -0.04
ABCF3-210ENST00000473311 SAYSD1Q9NPB0 183 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 DMAP1Q9NPF5 467 aaPredicted RBP14.78□□□□□ -0.04
ABCF3-210ENST00000473311 TMCO1Q9UM00 188 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 PCDHA10Q9Y5I2 948 aa14.78□□□□□ -0.04
ABCF3-210ENST00000473311 FAM47DPA6NHR8 397 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 PI4K2BG5E9Z4 385 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 WDR46O15213 610 aaKnown RBP14.77□□□□□ -0.04
ABCF3-210ENST00000473311 TLR3O15455 904 aaKnown RBP14.77□□□□□ -0.04
ABCF3-210ENST00000473311 ZNF862O60290 1169 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 SPAG7O75391 227 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 POTEJP0CG39 1038 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 TAC1P20366 129 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 MGAT5Q09328 741 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 TMEM63BQ5T3F8 832 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 TMEM270Q6UE05 265 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 ANKS1BQ7Z6G8 1248 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 KATNAL2Q8IYT4 538 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 SAMD3Q8N6K7 520 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 VCX3BQ9H321 246 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 C17orf75Q9HAS0 396 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 VCX3AQ9NNX9 186 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 PXMP2Q9NR77 195 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.77□□□□□ -0.04
ABCF3-210ENST00000473311 SCAF8Q9UPN6 1271 aaKnown RBP14.77□□□□□ -0.04
ABCF3-210ENST00000473311 PCDHB4Q9Y5E5 795 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 ACTL7BQ9Y614 415 aa14.77□□□□□ -0.04
ABCF3-210ENST00000473311 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.77□□□□□ -0.04
ABCF3-210ENST00000473311 POC1B-GALNT4F8VUJ3 575 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 DESP17661 470 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 GNA15P30679 374 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 FOXN2P32314 431 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 CETN2P41208 172 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 LIG4P49917 911 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 KLC1Q07866 573 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 MAMLD1Q13495 774 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 C15orf39Q6ZRI6 1047 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 FLAD1Q8NFF5 587 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 SLC38A10Q9HBR0 1119 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 ARHGEF3Q9NR81 526 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 ATXN10Q9UBB4 475 aa14.77□□□□□ -0.05
ABCF3-210ENST00000473311 KRT10P13645 584 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 ATF7P17544 494 aaPredicted RBP14.76□□□□□ -0.05
ABCF3-210ENST00000473311 KLRC2P26717 231 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 MSH2P43246 934 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 NOMO3P69849 1222 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 GHRHRQ02643 423 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 ATP13A4Q4VNC1 1196 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 HP1BP3Q5SSJ5 553 aaPredicted RBP14.76□□□□□ -0.05
ABCF3-210ENST00000473311 TDRD10Q5VZ19 366 aaKnown RBP14.76□□□□□ -0.05
ABCF3-210ENST00000473311 RNF43Q68DV7 783 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 CAPN12Q6ZSI9 719 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 ZCCHC9Q8N567 271 aaKnown RBP14.76□□□□□ -0.05
ABCF3-210ENST00000473311 EXD1Q8NHP7 514 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 GRAMD1AQ96CP6 724 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 CFAP57Q96MR6 1250 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 TSPAN18Q96SJ8 248 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 FAM167BQ9BTA0 163 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 RMI1Q9H9A7 625 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 PICK1Q9NRD5 415 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 SEPT9Q9UHD8 586 aaPredicted RBP14.76□□□□□ -0.05
ABCF3-210ENST00000473311 ZNF148Q9UQR1 794 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 CDC25CP30307 473 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 ACOT2P49753 483 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 WDR4P57081 412 aaKnown RBP14.76□□□□□ -0.05
ABCF3-210ENST00000473311 ZACNQ401N2 412 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 TAS1R3Q7RTX0 852 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 ECHDC2Q86YB7 292 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 RIBC1Q8N443 379 aaPredicted RBP14.76□□□□□ -0.05
ABCF3-210ENST00000473311 FBF1Q8TES7 1133 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 EURLQ9NYK6 297 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 WDR81Q562E7 1941 aa14.76□□□□□ -0.05
ABCF3-210ENST00000473311 EXTL3O43909 919 aa14.75□□□□□ -0.05
ABCF3-210ENST00000473311 WNT7BP56706 349 aa14.75□□□□□ -0.05
ABCF3-210ENST00000473311 NFX1Q12986 1120 aaKnown RBP14.75□□□□□ -0.05
ABCF3-210ENST00000473311 DNAJC3Q13217 504 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms