RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ETS2P15036 469 aa13.02□□□□□ -0.32
USP11-206ENST00000469080 FLT3P36888 993 aa13.02□□□□□ -0.32
USP11-206ENST00000469080 MUM1Q2TAK8 710 aa13.02□□□□□ -0.32
USP11-206ENST00000469080 FBXL5Q9UKA1 691 aa13.02□□□□□ -0.32
USP11-206ENST00000469080 DAAM1Q9Y4D1 1078 aa13.02□□□□□ -0.32
USP11-206ENST00000469080 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.33
USP11-206ENST00000469080 USP2O75604 605 aaPredicted RBP13.02□□□□□ -0.33
USP11-206ENST00000469080 UBA1P22314 1058 aaKnown RBP13.02□□□□□ -0.33
USP11-206ENST00000469080 RRM1P23921 792 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 CCNFP41002 786 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 GPC5P78333 572 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 MCL1Q07820 350 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 ATP13A4Q4VNC1 1196 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 FAM47CQ5HY64 1035 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 EPM2AIP1Q7L775 607 aaPredicted RBP13.02□□□□□ -0.33
USP11-206ENST00000469080 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 RFFLQ8WZ73 363 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 SLC35B4Q969S0 331 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.33
USP11-206ENST00000469080 MBOAT7Q96N66 472 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 PCDHB18PQ96TA0 734 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 ADAM22Q9P0K1 906 aa13.02□□□□□ -0.33
USP11-206ENST00000469080 DGAT1O75907 488 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 RGS20O76081 388 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 MYZAPP0CAP1 466 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 SFNP31947 248 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 GBP1P32455 592 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 ZNF268Q14587 947 aaPredicted RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 UAP1Q16222 522 aaPredicted RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 IQCF2Q8IXL9 164 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 SYCE1Q8N0S2 351 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 RNF10Q8N5U6 811 aaKnown RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 KREMEN1Q96MU8 473 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 AGAP3Q96P47 875 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 MMP19Q99542 508 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 PORCNQ9H237 461 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 MAGED2Q9UNF1 606 aaPredicted RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 NOVA2Q9UNW9 492 aaKnown RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 MYO9BQ13459 2157 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 ZNF831Q5JPB2 1677 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 GNA15P30679 374 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 XKR3Q5GH77 459 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 CCNJLQ8IV13 435 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 SDR16C5Q8N3Y7 309 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 SMYD1Q8NB12 490 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 MCPH1Q8NEM0 835 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 ELAC2Q9BQ52 826 aaKnown RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 TXNRD2Q9NNW7 524 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 COG5Q9UP83 839 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 TMEM221A6NGB7 291 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 FOXO6A8MYZ6 492 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 PDLIM1O00151 329 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 SLC16A3O15427 465 aaKnown RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 KRT10P13645 584 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 WNT7BP56706 349 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 DR1Q01658 176 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 BYSLQ13895 437 aaKnown RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 LBRQ14739 615 aaKnown RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 KCNT1Q5JUK3 1230 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 MEI1Q5TIA1 1274 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 RUFY4Q6ZNE9 571 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 UCMAQ8WVF2 138 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 ALG3Q92685 438 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 IQCDQ96DY2 449 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 CDCA5Q96FF9 252 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
USP11-206ENST00000469080 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP11-206ENST00000469080 ZMYND8Q9ULU4 1186 aaPredicted RBP13.01□□□□□ -0.33
USP11-206ENST00000469080 ERVK-9P63128 1117 aa13□□□□□ -0.33
USP11-206ENST00000469080 IFRD2Q12894 506 aaPredicted RBP13□□□□□ -0.33
USP11-206ENST00000469080 SGO2Q562F6 1265 aa13□□□□□ -0.33
USP11-206ENST00000469080 SH2D4BQ5SQS7 431 aa13□□□□□ -0.33
USP11-206ENST00000469080 WDR60Q8WVS4 1066 aa13□□□□□ -0.33
USP11-206ENST00000469080 ERVK-5Q9HDB9 667 aa13□□□□□ -0.33
USP11-206ENST00000469080 SAMD15Q9P1V8 674 aa13□□□□□ -0.33
USP11-206ENST00000469080 AGAP1Q9UPQ3 857 aa13□□□□□ -0.33
USP11-206ENST00000469080 AGTPBP1Q9UPW5 1226 aa13□□□□□ -0.33
USP11-206ENST00000469080 LAMB1P07942 1786 aa13□□□□□ -0.33
USP11-206ENST00000469080 TBC1D12O60347 775 aa13□□□□□ -0.33
USP11-206ENST00000469080 SUPT20HL2P0C7V6 817 aa13□□□□□ -0.33
USP11-206ENST00000469080 CYP11B1P15538 503 aa13□□□□□ -0.33
USP11-206ENST00000469080 ADCY8P40145 1251 aa13□□□□□ -0.33
USP11-206ENST00000469080 RGS7P49802 495 aa13□□□□□ -0.33
USP11-206ENST00000469080 EFCAB12Q6NXP0 572 aa13□□□□□ -0.33
USP11-206ENST00000469080 APLFQ8IW19 511 aaPredicted RBP13□□□□□ -0.33
USP11-206ENST00000469080 ZBTB8OSQ8IWT0 167 aa13□□□□□ -0.33
USP11-206ENST00000469080 C4orf19Q8IY42 314 aa13□□□□□ -0.33
USP11-206ENST00000469080 CLIP3Q96DZ5 547 aa13□□□□□ -0.33
USP11-206ENST00000469080 SUCLA2Q9P2R7 463 aaPredicted RBP13□□□□□ -0.33
USP11-206ENST00000469080 R3HDM2Q9Y2K5 976 aaKnown RBP13□□□□□ -0.33
USP11-206ENST00000469080 HES2Q9Y543 173 aa13□□□□□ -0.33
USP11-206ENST00000469080 ANKRD31Q8N7Z5 1873 aa13□□□□□ -0.33
USP11-206ENST00000469080 KRT16P08779 473 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms