RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ATXN3LQ9H3M9 355 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 CERS4Q9HA82 394 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 IFT122Q9HBG6 1241 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 RAVER2Q9HCJ3 691 aaKnown RBP5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 PDLIM7Q9NR12 457 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 GPR27Q9NS67 375 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 GPRC5BQ9NZH0 403 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 CDC23Q9UJX2 597 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 CCPG1Q9ULG6 757 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 SLC45A1Q9Y2W3 748 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 CTDP1Q9Y5B0 961 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 PCDHGC5Q9Y5F6 944 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 PCDHA11Q9Y5I1 949 aa5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 SRPRBQ9Y5M8 271 aaKnown RBP5.72□□□□□ -1.49
HMGB1P4-201ENST00000455362 CYP3A7-CYP3A51PA0A087WV96 503 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 LOC100289279A0A1B0GTE1 492 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 FAM237AA0A1B0GTK4 181 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 A0A1B0GVC2 190 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 A0A1B0GVL5 298 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 H3BML4 177 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 CCNT1O60563 726 aaKnown RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 PYGLP06737 847 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 CETPP11597 493 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ALAS1P13196 640 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ABCB4P21439 1286 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 CYP3A7P24462 503 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 HOXA13P31271 388 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 SREBF1P36956 1147 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 PRIM2P49643 509 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 HSD17B4P51659 736 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 PHC1P78364 1004 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 GRIN1Q05586 938 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ORC2Q13416 577 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 SNW1Q13573 536 aaKnown RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 BLMHQ13867 455 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 IL17AQ16552 155 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 LETM2Q2VYF4 491 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ANO4Q32M45 955 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 UAP1L1Q3KQV9 507 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 FAM133BQ5BKY9 247 aaKnown RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 MUM1L1Q5H9M0 696 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 DGKKQ5KSL6 1271 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 EXOSC6Q5RKV6 272 aaKnown RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 INTS11Q5TA45 600 aaKnown RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 RESP18Q5W5W9 173 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ARL6IP4Q66PJ3 421 aaKnown RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 CAVIN1Q6NZI2 390 aaKnown RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 FAM180BQ6P0A1 224 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 SHC4Q6S5L8 630 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 SLCO4C1Q6ZQN7 724 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 C1orf122Q6ZSJ8 110 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 GPR155Q7Z3F1 870 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 KRT77Q7Z794 578 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 FMR1NBQ8N0W7 255 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 MB21D1Q8N884 522 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 FSIP1Q8NA03 581 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 CRYGNQ8WXF5 182 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 FBXW5Q969U6 566 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 FERMT2Q96AC1 680 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 MBOAT7Q96N66 472 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 TEX13BQ9BXU2 312 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ANO3Q9BYT9 981 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ASCC2Q9H1I8 757 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 GOLPH3LQ9H4A5 285 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 CATSPERZQ9NTU4 200 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 AGTPBP1Q9UPW5 1226 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 RIPK3Q9Y572 518 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 ITIH6Q6UXX5 1313 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 PASKQ96RG2 1323 aa5.71□□□□□ -1.5
HMGB1P4-201ENST00000455362 CCL15-CCL14A0A0B4J2E2 113 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CAPN8A6NHC0 703 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 RHPN2P1A8MT19 583 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 LAD1O00515 517 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 NFIBO00712 420 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 NCAM2O15394 837 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 B3GALT2O43825 422 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 KDM1AO60341 852 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 NEMFO60524 1076 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 UBXN7O94888 489 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 TDP2O95551 362 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 THBDP07204 575 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CYP3A4P08684 503 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZBTB48P10074 688 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 GCFC2P16383 781 aaKnown RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 SLC9A1P19634 815 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 C5AR1P21730 350 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 TNFSF4P23510 183 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CIITAP33076 1130 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CD68P34810 354 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 LTBRP36941 435 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 PRPHP41219 470 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 RXRGP48443 463 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 NDUFA8P51970 172 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 HUNKP57058 714 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 HERVK_113P62684 666 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 IRX3P78415 501 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 POU4F1Q01851 419 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 SLBPQ14493 270 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 PLS1Q14651 629 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CRY1Q16526 586 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms