RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 PLS3P13797 630 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 NAGAP17050 411 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CD9P21926 228 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CA8P35219 290 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 GRIK1P39086 918 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 IARSP41252 1262 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 KIR3DL1P43629 444 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ZNF131P52739 623 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 GNG11P61952 73 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 KRT85P78386 507 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 COX10Q12887 443 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 KCNAB2Q13303 367 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 KLF1Q13351 362 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PDCLQ13371 301 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 TCIRG1Q13488 830 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ITGA9Q13797 1035 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 E2F2Q14209 437 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PLS1Q14651 629 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 WTAPQ15007 396 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PCBP2Q15366 365 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 VPS72Q15906 364 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CNPY1Q3B7I2 92 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ARL13BQ3SXY8 428 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 RABL6Q3YEC7 729 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SGO2Q562F6 1265 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SPECC1Q5M775 1068 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SFRP5Q5T4F7 317 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ATL3Q6DD88 541 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAM171BQ6P995 826 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 EMBQ6PCB8 327 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 DHRS4L2Q6PKH6 230 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SLC4A10Q6U841 1118 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 UNC13DQ70J99 1090 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ASRGL1Q7L266 308 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 NLRP9Q7RTR0 991 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 TRAPPC11Q7Z392 1133 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CTAGE6Q86UF2 777 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 DZIP1Q86YF9 867 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 TPH2Q8IWU9 490 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CTAGE4Q8IX94 777 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAM186BQ8IYM0 893 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SAMD14Q8IZD0 417 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CPA6Q8N4T0 437 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 TMEM57Q8N5G2 664 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ANKS4BQ8N8V4 417 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 EIF1ADQ8N9N8 165 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 DAGLBQ8NCG7 672 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CLRN3Q8NCR9 226 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 RCBTB1Q8NDN9 531 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 C1orf162Q8NEQ5 155 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CCDC110Q8TBZ0 833 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SUN5Q8TC36 379 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 FNDC8Q8TC99 324 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 FBXO41Q8TF61 875 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 RIN2Q8WYP3 895 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 DIO2Q92813 273 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SKA1Q96BD8 255 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CENPTQ96BT3 561 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 EFHD2Q96C19 240 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 MPP4Q96JB8 637 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PGBD1Q96JS3 809 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SCYL1Q96KG9 808 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 MAP3K14Q99558 947 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SLF1Q9BQI6 1058 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ALG1Q9BT22 464 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 DUSP23Q9BVJ7 150 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SELENOOQ9BVL4 669 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 NAA15Q9BXJ9 866 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 SLC12A9Q9BXP2 914 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CEP41Q9BYV8 373 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 XPO4Q9C0E2 1151 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 B3GNT4Q9C0J1 378 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ASCC2Q9H1I8 757 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CARD9Q9H257 536 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CCDC134Q9H6E4 229 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ARHGEF3Q9NR81 526 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PANK4Q9NVE7 773 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 STK32BQ9NY57 414 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PTTG2Q9NZH5 202 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 IL1RAPL1Q9NZN1 696 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ADAM22Q9P0K1 906 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CLEC1BQ9P126 229 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 CRNNQ9UBG3 495 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 STAP2Q9UGK3 403 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PNMA8BQ9ULN7 279 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 ANKRD6Q9Y2G4 727 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 LRCH1Q9Y2L9 728 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 RAXQ9Y2V3 346 aa3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 LUC7L2Q9Y383 392 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 MED1Q15648 1581 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PDS5AQ29RF7 1337 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 DDX60Q8IY21 1712 aaKnown RBP3.87□□□□□ -1.79
HMGB3P8-201ENST00000449709 PSME4Q14997 1843 aa3.86□□□□□ -1.79
HMGB3P8-201ENST00000449709 BICRAQ9NZM4 1560 aa3.86□□□□□ -1.79
HMGB3P8-201ENST00000449709 PTPDC1A2A3K4 754 aa3.86□□□□□ -1.79
HMGB3P8-201ENST00000449709 PABPN1LA6NDY0 278 aaKnown RBP3.86□□□□□ -1.79
HMGB3P8-201ENST00000449709 CCT8L1PA6NM43 557 aa3.86□□□□□ -1.79
HMGB3P8-201ENST00000449709 VSTM5A8MXK1 200 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms