RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MFSD6LQ8IWD5 586 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 YAF2Q8IY57 180 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 FAM200AQ8TCP9 573 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 PSMG2Q969U7 264 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 SAAL1Q96ER3 474 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 ZNF560Q96MR9 790 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 SEPT5Q99719 369 aaPredicted RBP22.72■■□□□ 1.23
VSX1-206ENST00000444511 BACH2Q9BYV9 841 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 ZCWPW1Q9H0M4 648 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 TRPV5Q9NQA5 729 aa22.72■■□□□ 1.23
VSX1-206ENST00000444511 PTPRZ1P23471 2315 aaPredicted RBP22.71■■□□□ 1.23
VSX1-206ENST00000444511 MIA3Q5JRA6 1907 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 HEPACAM2A8MVW5 462 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 KPNA7A9QM74 516 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 FGF19O95750 216 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 LDHAP00338 332 aaKnown RBP22.71■■□□□ 1.23
VSX1-206ENST00000444511 RPS9P46781 194 aaKnown RBP22.71■■□□□ 1.23
VSX1-206ENST00000444511 CASP5P51878 434 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 TFAMQ00059 246 aaKnown RBP22.71■■□□□ 1.23
VSX1-206ENST00000444511 CSTF1Q05048 431 aaKnown RBP22.71■■□□□ 1.23
VSX1-206ENST00000444511 VEPH1Q14D04 833 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 STK38Q15208 465 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 ZNF528Q3MIS6 628 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 MGAT5BQ3V5L5 792 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 WSCD1Q658N2 575 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 PDILTQ8N807 584 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 ATXN3LQ9H3M9 355 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 PANK4Q9NVE7 773 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 NDRG2Q9UN36 371 aaKnown RBP22.71■■□□□ 1.23
VSX1-206ENST00000444511 VPS13AQ96RL7 3174 aa22.71■■□□□ 1.23
VSX1-206ENST00000444511 RIF1Q5UIP0 2472 aaKnown RBP22.7■■□□□ 1.22
VSX1-206ENST00000444511 CFAP54Q96N23 3096 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 A0A087X0B3 334 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 GARTP22102 1010 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 PNPLA4P41247 253 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 CDR1P51861 262 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 ARHGAP15Q53QZ3 475 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 STXBP5Q5T5C0 1151 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 BRSK2Q8IWQ3 736 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 RBAKQ9NYW8 714 aaPredicted RBP22.7■■□□□ 1.22
VSX1-206ENST00000444511 PIAS3Q9Y6X2 628 aa22.7■■□□□ 1.22
VSX1-206ENST00000444511 NCANO14594 1321 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 FRMD3A2A2Y4 597 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 SHISA7A6NL88 538 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 KINO60870 393 aaKnown RBP22.69■■□□□ 1.22
VSX1-206ENST00000444511 GABRR2P28476 465 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 NASPP49321 788 aaPredicted RBP22.69■■□□□ 1.22
VSX1-206ENST00000444511 SMARCB1Q12824 385 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 TAF12Q16514 161 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 GAREM2Q75VX8 874 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 CCDC65Q8IXS2 484 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 CSGALNACT1Q8TDX6 532 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 NOC3LQ8WTT2 800 aaKnown RBP22.69■■□□□ 1.22
VSX1-206ENST00000444511 C2orf15Q8WU43 125 aaKnown RBP22.69■■□□□ 1.22
VSX1-206ENST00000444511 CACTINQ8WUQ7 758 aaKnown RBP22.69■■□□□ 1.22
VSX1-206ENST00000444511 FAM3CQ92520 227 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 BORCS6Q96GS4 357 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 LPIN3Q9BQK8 851 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 TMEM206Q9H813 350 aa22.69■■□□□ 1.22
VSX1-206ENST00000444511 FAM186AA6NE01 2351 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 DPYSL4O14531 572 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 ITGB3P05106 788 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 POLR2BP30876 1174 aaKnown RBP22.68■■□□□ 1.22
VSX1-206ENST00000444511 WNT7BP56706 349 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 FZD5Q13467 585 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 GPR158Q5T848 1215 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 GPIHBP1Q8IV16 184 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 ARID3BQ8IVW6 561 aaPredicted RBP22.68■■□□□ 1.22
VSX1-206ENST00000444511 DCP1BQ8IZD4 617 aaKnown RBP22.68■■□□□ 1.22
VSX1-206ENST00000444511 LINC00301Q8NCQ3 95 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 ZSWIM2Q8NEG5 633 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 SPPL2BQ8TCT7 592 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 RSPRY1Q96DX4 576 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 GCNAQ96QF7 691 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 HINFPQ9BQA5 517 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 CBWD1Q9BRT8 395 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 FGFBP2Q9BYJ0 223 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 ABI2Q9NYB9 513 aaPredicted RBP22.68■■□□□ 1.22
VSX1-206ENST00000444511 AGAP1Q9UPQ3 857 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 TSC2P49815 1807 aa22.68■■□□□ 1.22
VSX1-206ENST00000444511 ANK1P16157 1881 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 GOLGA8IPA6NC78 632 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 GOLGA8JA6NMD2 632 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 EXTL3O43909 919 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 PRPF6O94906 941 aaKnown RBP22.67■■□□□ 1.22
VSX1-206ENST00000444511 ATF6P18850 670 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 STXBP4Q6ZWJ1 553 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 LRRTM3Q86VH5 581 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 ZNF396Q96N95 335 aaPredicted RBP22.67■■□□□ 1.22
VSX1-206ENST00000444511 LRRC27Q9C0I9 530 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 PCIF1Q9H4Z3 704 aa22.67■■□□□ 1.22
VSX1-206ENST00000444511 SPTLC2O15270 562 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 CHADO15335 359 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 CDC25CP30307 473 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 TSPY1Q01534 308 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 FCHO2Q0JRZ9 810 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 MTAPQ13126 283 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 C1orf127Q8N9H9 656 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 GIPC2Q8TF65 315 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 ATRIPQ8WXE1 791 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms