RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 HMGB1P1B2RPK0 211 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 BTBD19C9JJ37 291 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 ADCY6O43306 1168 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 ECEL1O95672 775 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 FNTAP49354 379 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 VPS41P49754 854 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 PMS2P54278 862 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 DRG2P55039 364 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 KLF1Q13351 362 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 KRT71Q3SY84 523 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 DENND1BQ6P3S1 775 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 SLC10A4Q96EP9 437 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 CXCL16Q9H2A7 254 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
SCAMP4-202ENST00000409472 F8VP50 259 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 SLC1A1P43005 524 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 PSMC4P43686 418 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 TFDP1Q14186 410 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 PPP1R7Q15435 360 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 SGSM1Q2NKQ1 1148 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 JADE1Q6IE81 842 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 LINC01465Q8N7H1 131 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 MS4A4AQ96JQ5 239 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 PWWP2AQ96N64 755 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 DCLK3Q9C098 648 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 AAASQ9NRG9 546 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 NOVA2Q9UNW9 492 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 ASB14A6NK59 587 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 SMIM23A6NLE4 172 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 B4GALT4O60513 344 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 CAND2O75155 1236 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 KRT10P13645 584 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 RDXP35241 583 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 SLC26A2P50443 739 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 AP3M2P53677 418 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 SLC29A2Q14542 456 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 CCDC25Q86WR0 208 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 SHCBP1Q8NEM2 672 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 FEZF2Q8TBJ5 459 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 ART4Q93070 314 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 PABPC3Q9H361 631 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 PDZD7Q9H5P4 517 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 TNFSF13BQ9Y275 285 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 CEP350Q5VT06 3117 aa16.09■□□□□ 0.17
SCAMP4-202ENST00000409472 TMEM191CA6NGB0 347 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 PODXLO00592 558 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 ITGB3P05106 788 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 STAG3L1P0CL83 205 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 CHKAP35790 457 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 CCT5P48643 541 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 RHOT1Q8IXI2 618 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 CXorf38Q8TB03 319 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 BCAS4Q8TDM0 211 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 CABS1Q96KC9 395 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 C16orf70Q9BSU1 422 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 PARVAQ9NVD7 372 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 FAM169AQ9Y6X4 670 aa16.08■□□□□ 0.17
SCAMP4-202ENST00000409472 CCL15-CCL14A0A0B4J2E2 113 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 PSTPIP1O43586 416 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 TNNC2P02585 160 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 ARF4P18085 180 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 LSP1P33241 339 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 SEC24CP53992 1094 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 MAGOHP61326 146 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 CCL15Q16663 113 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 WDR72Q3MJ13 1102 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 PTPN20Q4JDL3 420 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 ANKRD36BP1Q96IX9 119 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 VCPIP1Q96JH7 1222 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 DDX23Q9BUQ8 820 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 RPF1Q9H9Y2 349 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 MRPL47Q9HD33 250 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 SLC12A6Q9UHW9 1150 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 SCINQ9Y6U3 715 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 TRIP11Q15643 1979 aa16.08■□□□□ 0.16
SCAMP4-202ENST00000409472 CD19P15391 556 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 IVDP26440 423 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 IFFO1Q0D2I5 559 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 KATNAL2Q8IYT4 538 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 GLIS1Q8NBF1 620 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 OSBPL8Q9BZF1 889 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 ASIC3Q9UHC3 531 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 IVNS1ABPQ9Y6Y0 642 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 GOLGA8SH3BPF8 625 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 GH1P01241 217 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 ELF1P32519 619 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 PPP1R15BQ5SWA1 713 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 FBXW10Q5XX13 1052 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms