RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PLA2G4BP0C869 781 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 GRAMD1BQ3KR37 738 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 SLC2A7Q6PXP3 512 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 SFR1Q86XK3 245 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 TDRPQ86YL5 185 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 TCP10LQ8TDR4 215 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 KLF6Q99612 283 aaPredicted RBP13.46□□□□□ -0.25
HERC3-203ENST00000407637 AGPAT1Q99943 283 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.25
HERC3-203ENST00000407637 VPS37BQ9H9H4 285 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 HBS1LQ9Y450 684 aaKnown RBP13.46□□□□□ -0.25
HERC3-203ENST00000407637 C10orf71Q711Q0 1435 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 SPECC1L-ADORA2AF8WAN1 911 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 H3BSA7 217 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 FSCN2O14926 492 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 NDUFB5O43674 189 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 CAPN15O75808 1086 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 NFKBIAP25963 317 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 GNA11P29992 359 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 STT3AP46977 705 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 NCKAP1LP55160 1127 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 GPC5P78333 572 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 TFAP4Q01664 338 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 PFKPQ01813 784 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 KNOP1Q1ED39 458 aaKnown RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 ARSHQ5FYA8 562 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 JDP2Q8WYK2 163 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 DHRS1Q96LJ7 313 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 NACA2Q9H009 215 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 LIN28AQ9H9Z2 209 aaKnown RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 KIAA1522Q9P206 1035 aaPredicted RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 APPL1Q9UKG1 709 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 MAST2Q6P0Q8 1798 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 POTEB3A0JP26 581 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 CAPN8A6NHC0 703 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 CAPN14A8MX76 684 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 POTECB2RU33 542 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 EDIL3O43854 480 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 IL6STP40189 918 aaPredicted RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 KRT81Q14533 505 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 DLGAP5Q15398 846 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 AAGABQ6PD74 315 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 POTEBQ6S5H4 581 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 C3orf62Q6ZUJ4 267 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 SYDE1Q6ZW31 735 aaPredicted RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 ICA1LQ8NDH6 482 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 PPP1R10Q96QC0 940 aaKnown RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 SMYD3Q9H7B4 428 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.45□□□□□ -0.26
HERC3-203ENST00000407637 SELENONQ9NZV5 590 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 PPARGC1AQ9UBK2 798 aaKnown RBP13.45□□□□□ -0.26
HERC3-203ENST00000407637 ASTN1O14525 1302 aa13.45□□□□□ -0.26
HERC3-203ENST00000407637 GTPBP10A4D1E9 387 aaKnown RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 E5RJQ4 531 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 UBAP1LF5GYI3 381 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ADAM23O75077 832 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 PIAS1O75925 651 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 NOP14P78316 857 aaKnown RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 XIAPP98170 497 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ORC2Q13416 577 aaPredicted RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 C16orf72Q14CZ0 275 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ZYXQ15942 572 aaKnown RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 DNAL1Q4LDG9 190 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 EFHC1Q5JVL4 640 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 CLEC4GQ6UXB4 293 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ZNF410Q86VK4 478 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 RELL1Q8IUW5 271 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 HIPK4Q8NE63 616 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ZNF564Q8TBZ8 553 aaPredicted RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 PLEKHO2Q8TD55 490 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ZNF384Q8TF68 577 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 GRK7Q8WTQ7 553 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 DCLK3Q9C098 648 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ITGB1BP2Q9UKP3 347 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 TAF1LQ8IZX4 1826 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ARHGAP42A6NI28 874 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 CALUO43852 315 aaPredicted RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 CBFA2T3O75081 653 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 SORBS2O94875 1100 aaKnown RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 FDFT1P37268 417 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ENTPD1P49961 510 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 HDAC4P56524 1084 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 GK3PQ14409 553 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 ANKDD1AQ495B1 522 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms