RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 MLH1P40692 756 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 POM121L1PQ3SYA9 428 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 HABP4Q5JVS0 413 aaKnown RBP9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 PPP4R3CPQ6ZMV5 832 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 PTAR1Q7Z6K3 402 aaPredicted RBP9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 SAPCD2Q86UD0 394 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 CNOT6LQ96LI5 555 aaKnown RBP9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 ZBTB18Q99592 522 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 BBS2Q9BXC9 721 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 NEUROG2Q9H2A3 272 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 UMODL1Q5DID0 1318 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 CPED1A4D0V7 1026 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 TTC36A6NLP5 189 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 PYGBP11216 843 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 BRAFP15056 766 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 MZF1P28698 734 aaPredicted RBP9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 MAPK8P45983 427 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 RAP1GDS1P52306 607 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 KCNA1Q09470 495 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 TFDP2Q14188 446 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 KRT39Q6A163 491 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 KLHL7Q8IXQ5 586 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 GMCL1P1Q8NEA9 526 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 ZFYVE1Q9HBF4 777 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 BCL9O00512 1426 aa9.68□□□□□ -0.86
LIMCH1-202ENST00000381753 EEF2KO00418 725 aaKnown RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 DNM1LO00429 736 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 JUPP14923 745 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 TAC1P20366 129 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 CCND3P30281 292 aaPredicted RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 ZRANB3Q5FWF4 1079 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 TBC1D10CQ8IV04 446 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 RAPGEF5Q92565 580 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 COPS5Q92905 334 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 ESPNB1AK53 854 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 EYA4O95677 639 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 JMJD7P0C870 316 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PLS3P13797 630 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 GFPT1Q06210 699 aaPredicted RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 NCOA4Q13772 614 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 HIST2H2ACQ16777 129 aaPredicted RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 HIST2H2AA3Q6FI13 130 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 FAAH2Q6GMR7 532 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 CYP4X1Q8N118 509 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 NAT16Q8N8M0 369 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PPFIBP2Q8ND30 876 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PIGKQ92643 395 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 FAR2Q96K12 515 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PRRG4Q9BZD6 226 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 ST3GAL5Q9UNP4 418 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 SNCAIPQ9Y6H5 919 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 A6NCN8 305 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 GSTA4O15217 222 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 ARHGAP6O43182 974 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 KATNA1O75449 491 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 CYP2A6P11509 494 aaPredicted RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 VAV2P52735 878 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PCSK7Q16549 785 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 MPZL3Q6UWV2 235 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PCGF5Q86SE9 256 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 NPAS4Q8IUM7 802 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 MSL3Q8N5Y2 521 aaKnown RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 KCNS3Q9BQ31 491 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 STRADBQ9C0K7 418 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 ANKEF1Q9NU02 776 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 AIPL1Q9NZN9 384 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 NEXMIFQ5QGS0 1516 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 ANP32DO95626 131 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PYGLP06737 847 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 SYPP08247 313 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 MAP3K7CLP57077 242 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 TGM3Q08188 693 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 HP1BP3Q5SSJ5 553 aaPredicted RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 DEPDC1BQ8WUY9 529 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 IDI2Q9BXS1 227 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 STK33Q9BYT3 514 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 DUS2Q9NX74 493 aaKnown RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 KCPQ6ZWJ8 1503 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 CSE1LP55060 971 aaKnown RBP9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 PPP4CP60510 307 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 EFHC1Q5JVL4 640 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 MAB21L3Q8N8X9 362 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 ARHGEF26Q96DR7 871 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 RILPQ96NA2 401 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 TTPALQ9BTX7 342 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 NFE2L3Q9Y4A8 694 aa9.67□□□□□ -0.86
LIMCH1-202ENST00000381753 CCDC160A6NGH7 325 aa9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 NDUFS3O75489 264 aa9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 NR3C1P04150 777 aa9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 PCNX4Q63HM2 1172 aa9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 ESRP1Q6NXG1 681 aaKnown RBP9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 SLC30A10Q6XR72 485 aa9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 GUF1Q8N442 669 aaKnown RBP9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 ANKS4BQ8N8V4 417 aa9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 RAD54LQ92698 747 aa9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 TARS2Q9BW92 718 aaKnown RBP9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 ZCCHC2Q9C0B9 1178 aaKnown RBP9.66□□□□□ -0.86
LIMCH1-202ENST00000381753 PCDHGB4Q9UN71 923 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms