RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 FAM49BQ9NUQ9 324 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 PAK5Q9P286 719 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 CYP3A4P08684 503 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 MAPTP10636 758 aaKnown RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 KRT4P19013 534 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 PPM1FP49593 454 aaPredicted RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 KYAT1Q16773 422 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 CCDC124Q96CT7 223 aaKnown RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 PGBD4Q96DM1 585 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 VPS39Q96JC1 886 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 ELP3Q9H9T3 547 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 PXMP2Q9NR77 195 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 SLC12A6Q9UHW9 1150 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 IL18RAPO95256 599 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 HOXA10P31260 410 aaPredicted RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 IFI35P80217 286 aaPredicted RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 CAPRIN2Q6IMN6 1127 aaKnown RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 CERS5Q8N5B7 392 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 AGR3Q8TD06 166 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 KRT35Q92764 455 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 SPDL1Q96EA4 605 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 CLMNQ96JQ2 1002 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 MED15Q96RN5 788 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 KCTD10Q9H3F6 313 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 GTSE1Q9NYZ3 720 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 PHTF1Q9UMS5 762 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 CYP3A7-CYP3A51PA0A087WV96 503 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 GPD1P21695 349 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 CYP3A7P24462 503 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 CASP2P42575 452 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 GMPSP49915 693 aaPredicted RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 ORC1Q13415 861 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 STILQ15468 1287 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 KCNT1Q5JUK3 1230 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 TRIM67Q6ZTA4 783 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 MCOLN2Q8IZK6 566 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 LNX1Q8TBB1 728 aaPredicted RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 KAT5Q92993 513 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 ASB14A6NK59 587 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 ZNF263O14978 683 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 DPEP1P16444 411 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 ARPP19P56211 112 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 NPY5RQ15761 445 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 SPOUT1Q5T280 376 aaKnown RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 AADACL2Q6P093 401 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 ZKSCAN4Q969J2 545 aaPredicted RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 MKL1Q969V6 931 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 CGRRF1Q99675 332 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 FSD1LQ9BXM9 530 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 MAP3K20Q9NYL2 800 aaKnown RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 SPDYE16A6NNV3 312 aaPredicted RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 SUPT20HL2P0C7V6 817 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 NQO1P15559 274 aaKnown RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 PAMP19021 973 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 TARSP26639 723 aaKnown RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 TCF7P36402 384 aaPredicted RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 NAMPTP43490 491 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 OVGP1Q12889 678 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 STX3Q13277 289 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 GPR162Q16538 588 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 CCNG2Q16589 344 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 EXD1Q8NHP7 514 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 SLC26A7Q8TE54 656 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 MAGEB18Q96M61 343 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 FGFBP2Q9BYJ0 223 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 KDM4CQ9H3R0 1056 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.25□□□□□ -0.45
COPA-202ENST00000368069 LMO7Q8WWI1 1683 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 SMAPO00193 183 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 ATP9BO43861 1147 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 SPAG6O75602 509 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 SNRPAP09012 282 aaKnown RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 VCAM1P19320 739 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 TAC1P20366 129 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 DLG4P78352 724 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 OCRLQ01968 901 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 PPP3CAQ08209 521 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 PGM5Q15124 567 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 DACT2Q5SW24 774 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 KRT80Q6KB66 452 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 CENPKQ9BS16 269 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 NT5C1AQ9BXI3 368 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
COPA-202ENST00000368069 CPSF3Q9UKF6 684 aaKnown RBP12.25□□□□□ -0.45
COPA-202ENST00000368069 PPP1R12AO14974 1030 aaPredicted RBP12.24□□□□□ -0.45
COPA-202ENST00000368069 OGTO15294 1046 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 UBOX5O94941 541 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 SULT1E1P49888 294 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 TFDP3Q5H9I0 405 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 ITPRIPL1Q6GPH6 555 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 EFCAB12Q6NXP0 572 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 CHST13Q8NET6 341 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 ATP6V1E2Q96A05 226 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms