RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CHST7Q9NS84 486 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 INO80B-WBP1J3KQ70 363 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 SMAPO00193 183 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 PSTPIP1O43586 416 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 POLR3CQ9BUI4 534 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 TRIM15Q9C019 465 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 INO80BQ9C086 356 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 GTSE1Q9NYZ3 720 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 KDM1AO60341 852 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 PSMC6P62333 389 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 MRPS9P82933 396 aaKnown RBP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 FEZF2Q8TBJ5 459 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 IL1RL1Q01638 556 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 FLOT2Q14254 428 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 MROH9Q5TGP6 573 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 RNF220Q5VTB9 566 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 RSPH3Q86UC2 560 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 DMAP1Q9NPF5 467 aaPredicted RBP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 DIP2BQ9P265 1576 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 KCNN4O15554 427 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 SERPINB9P50453 376 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 GRM1Q13255 1194 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 PRPSAP1Q14558 356 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 EFTUD2Q15029 972 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 SLC47A2Q86VL8 602 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 C4orf32Q8N8J7 132 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 FLAD1Q8NFF5 587 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 ACSF2Q96CM8 615 aaPredicted RBP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 TMA16Q96EY4 203 aaKnown RBP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 OXNAD1Q96HP4 312 aaPredicted RBP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 NMRK1Q9NWW6 199 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 ARHGAP26Q9UNA1 814 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 AGLP35573 1532 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 JAK3P52333 1124 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 PIGHQ14442 188 aaPredicted RBP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 GCOM2Q9BZD3 368 aaPredicted RBP16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 TBC1D22BQ9NU19 505 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 TAS2R14Q9NYV8 317 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 GRID1Q9ULK0 1009 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 ACTL7BQ9Y614 415 aa16.73■□□□□ 0.27
CLSTN1-201ENST00000361311 MGEA5O60502 916 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 TCN1P20061 433 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 TPP2P29144 1249 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 C6orf89Q6UWU4 347 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 C16orf89Q6UX73 402 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 RASGEF1CQ8N431 466 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 CERKQ8TCT0 537 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 SIKE1Q9BRV8 207 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 RPL26L1Q9UNX3 145 aaKnown RBP16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 RPA3P35244 121 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 PIGWQ7Z7B1 504 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 LNX1Q8TBB1 728 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 SPATA18Q8TC71 538 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 LZICQ8WZA0 190 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 ALG3Q92685 438 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 ART4Q93070 314 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 ATXN7L3BQ96GX2 97 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 MAML3Q96JK9 1138 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 RBAKQ9NYW8 714 aaPredicted RBP16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 TSC22D4Q9Y3Q8 395 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 MAP4P27816 1152 aaKnown RBP16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 COBLL1Q53SF7 1204 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 KCTD17Q8N5Z5 321 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 C7orf31Q8N865 590 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 VGLL2Q8N8G2 317 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 LRMDAQ9H2I8 198 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 GJA3Q9Y6H8 435 aa16.72■□□□□ 0.27
CLSTN1-201ENST00000361311 ALDH1B1P30837 517 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 PSMD7P51665 324 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 CDK16Q00536 496 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 SURF1Q15526 300 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 ZNF699Q32M78 642 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 HEATR6Q6AI08 1181 aaKnown RBP16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 LRRC8EQ6NSJ5 796 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 FAM71DQ8N9W8 422 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 INPP5FQ9Y2H2 1132 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 PSAPP07602 524 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 PTK6Q13882 451 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 KIF19Q2TAC6 998 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 SMTNL2Q2TAL5 461 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 JADE3Q92613 823 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 DNAJC19Q96DA6 116 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 MTMR9Q96QG7 549 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 MSH4O15457 936 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 NTSR2O95665 410 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 MMP14P50281 582 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 COG2Q14746 738 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 ZNF677Q86XU0 584 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 RMDN2Q96LZ7 410 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 ERVK-5Q9HDB9 667 aa16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 AGO2Q9UKV8 859 aaKnown RBP16.71■□□□□ 0.27
CLSTN1-201ENST00000361311 PROSCO94903 275 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 GCLCP48506 637 aaPredicted RBP16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 SESN2P58004 480 aaPredicted RBP16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 FAM102AQ5T9C2 384 aaPredicted RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms