RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 DDX27Q96GQ7 796 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 ARHGAP9Q9BRR9 750 aa9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 NIFKQ9BYG3 293 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 IFT122Q9HBG6 1241 aa9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 KLK14Q9P0G3 267 aa9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 TBX20Q9UMR3 447 aa9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 TMEM131Q92545 1883 aa9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 CABIN1Q9Y6J0 2220 aa9.95□□□□□ -0.82
UBE2D3-205ENST00000350435 OTOGQ6ZRI0 2925 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 ESYT2A0FGR8 921 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 K7ENP7 123 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 MEIS1O00470 390 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 ERLIN2O94905 339 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 TKTP29401 623 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 GRK6P43250 576 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 PRKCEQ02156 737 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 CYP4A11Q02928 519 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 TPGS2Q68CL5 300 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 NOTUMQ6P988 496 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 INO80CQ6PI98 192 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 IL27RAQ6UWB1 636 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 SRGAP1Q7Z6B7 1085 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 DPH1Q9BZG8 443 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 ATXN3LQ9H3M9 355 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 GMIPQ9P107 970 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 PARP2Q9UGN5 583 aa9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 FNDC3AQ9Y2H6 1198 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-205ENST00000350435 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 DHX15O43143 795 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 TRAPPC3O43617 180 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 SFTPCP11686 197 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 HNRNPLP14866 589 aaKnown RBP eCLIP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 ARSAP15289 507 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 WEE1P30291 646 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 AXLP30530 894 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 USP11P51784 963 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 NCBP1Q09161 790 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 HLA-BQ31612 363 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 MTERF2Q49AM1 385 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 WDR45BQ5MNZ6 344 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 HES3Q5TGS1 186 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 TICAM1Q8IUC6 712 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 SRRM1Q8IYB3 904 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 CPA6Q8N4T0 437 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 CCDC51Q96ER9 411 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 RRP36Q96EU6 259 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 HIC2Q96JB3 615 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 ZNF578Q96N58 590 aaPredicted RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 NXF3Q9H4D5 531 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 ZSWIM5Q9P217 1185 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 FTSJ1Q9UET6 329 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 PCDHGA1Q9Y5H4 931 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 ANK1P16157 1881 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 F8P00451 2351 aa9.93□□□□□ -0.82
UBE2D3-205ENST00000350435 IGKV6-21A0A0C4DH24 114 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 TCRBV21S2A2A0A5A6 115 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 ZNF213O14771 459 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 FGF19O95750 216 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 MRPS21P82921 87 aaKnown RBP9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 FOXK1P85037 733 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 PLD1Q13393 1074 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 LRRC3Q9BY71 257 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 MINDY3Q9H8M7 445 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 TBC1D22BQ9NU19 505 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 COL4A3BPQ9Y5P4 624 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 CSMD1Q96PZ7 3565 aa9.92□□□□□ -0.82
UBE2D3-205ENST00000350435 CELSR1Q9NYQ6 3014 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 K7EQS6 105 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 NDUFS2O75306 463 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 RFPL3O75679 317 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 THP07101 528 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 SRGAP2CP0DJJ0 459 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 MAOBP27338 520 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 SMARCA1P28370 1054 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 EPHB3P54753 998 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 PDGFRLQ15198 375 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 SF3A1Q15459 793 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 TARBP2Q15633 366 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 INAVAQ3KP66 663 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 EOGTQ5NDL2 527 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 CCDC81Q6ZN84 652 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 NIPA1Q7RTP0 329 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 ZC3H18Q86VM9 953 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 PLA2G4DQ86XP0 818 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 TXNDC5Q8NBS9 432 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 OXER1Q8TDS5 423 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 FOXJ1Q92949 421 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 POM121Q96HA1 1249 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 CPB2Q96IY4 423 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 SMG9Q9H0W8 520 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 TASP1Q9H6P5 420 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 ECT2Q9H8V3 914 aa9.91□□□□□ -0.82
UBE2D3-205ENST00000350435 AFF4Q9UHB7 1163 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms