RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 LMBRD2Q68DH5 695 aaPredicted RBP18.41■□□□□ 0.54
BRCC3-202ENST00000340647 UNC13DQ70J99 1090 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 MTSS1LQ765P7 747 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 SYCP3Q8IZU3 236 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 GPD1LQ8N335 351 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 OR5B17Q8NGF7 314 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 SHKBP1Q8TBC3 707 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 PYM1Q9BRP8 204 aaKnown RBP18.41■□□□□ 0.54
BRCC3-202ENST00000340647 MKNK1Q9BUB5 465 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 MFSD1Q9H3U5 465 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 TMEM206Q9H813 350 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 TBC1D17Q9HA65 648 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 ARHGEF3Q9NR81 526 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 TMLHEQ9NVH6 421 aa18.41■□□□□ 0.54
BRCC3-202ENST00000340647 KIF26AQ9ULI4 1882 aaPredicted RBP18.41■□□□□ 0.54
BRCC3-202ENST00000340647 KPNA7A9QM74 516 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 EIF3DO15371 548 aaKnown RBP eCLIP18.4■□□□□ 0.54
BRCC3-202ENST00000340647 LRRN2O75325 713 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 ECI2O75521 394 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 LDHAP00338 332 aaKnown RBP18.4■□□□□ 0.54
BRCC3-202ENST00000340647 HSP90AA1P07900 732 aaKnown RBP18.4■□□□□ 0.54
BRCC3-202ENST00000340647 PAX3P23760 479 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 ME1P48163 572 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 STARD6P59095 220 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 TFAMQ00059 246 aaKnown RBP18.4■□□□□ 0.54
BRCC3-202ENST00000340647 CCDC142Q17RM4 750 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 FAM26FQ5R3K3 315 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 ARMCX5Q6P1M9 558 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 OSTM1Q86WC4 334 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 LEO1Q8WVC0 666 aaPredicted RBP18.4■□□□□ 0.54
BRCC3-202ENST00000340647 RSPRY1Q96DX4 576 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 ASB16Q96NS5 453 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 DDX23Q9BUQ8 820 aaKnown RBP18.4■□□□□ 0.54
BRCC3-202ENST00000340647 HSPBP1Q9NZL4 362 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 SERTAD1Q9UHV2 236 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 AGAP1Q9UPQ3 857 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 ANAPC1Q9H1A4 1944 aa18.4■□□□□ 0.54
BRCC3-202ENST00000340647 PTPRZ1P23471 2315 aaPredicted RBP18.4■□□□□ 0.54
BRCC3-202ENST00000340647 SPTBN4Q9H254 2564 aa18.39■□□□□ 0.54
BRCC3-202ENST00000340647 HCRTO43612 131 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 ATF6P18850 670 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 AFMP43652 599 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 TEAD2Q15562 447 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 STXBP5Q5T5C0 1151 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 PHLDB3Q6NSJ2 640 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 GAREM2Q75VX8 874 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 ASCL5Q7RTU5 278 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 LIMS2Q7Z4I7 341 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 CCDC105Q8IYK2 499 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 ZNF512Q96ME7 567 aaPredicted RBP18.39■□□□□ 0.53
BRCC3-202ENST00000340647 PKMYT1Q99640 499 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 FOXQ1Q9C009 403 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 MTMR12Q9C0I1 747 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 AGPAT3Q9NRZ7 376 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 INTS13Q9NVM9 706 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 L1RE1Q9UN81 338 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 HPSEQ9Y251 543 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 MTF2Q9Y483 593 aaPredicted RBP18.39■□□□□ 0.53
BRCC3-202ENST00000340647 F5P12259 2224 aa18.39■□□□□ 0.53
BRCC3-202ENST00000340647 ZNF638Q14966 1978 aaKnown RBP18.39■□□□□ 0.53
BRCC3-202ENST00000340647 PROB1E7EW31 1015 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 MYL4P12829 197 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 AMPD3Q01432 767 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 SNW1Q13573 536 aaKnown RBP18.38■□□□□ 0.53
BRCC3-202ENST00000340647 BMT2Q1RMZ1 405 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 SLC39A12Q504Y0 691 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 PDZD4Q76G19 769 aaPredicted RBP18.38■□□□□ 0.53
BRCC3-202ENST00000340647 DNAJB7Q7Z6W7 309 aaPredicted RBP18.38■□□□□ 0.53
BRCC3-202ENST00000340647 PDCL2Q8N4E4 241 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 ELSPBP1Q96BH3 223 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 PAGE5Q96GU1 130 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 LRRC3BQ96PB8 259 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 LPIN3Q9BQK8 851 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 LRRC27Q9C0I9 530 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 IRF2BPLQ9H1B7 796 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 MAGEF1Q9HAY2 307 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 IL21Q9HBE4 155 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 CFAP45Q9UL16 551 aa18.38■□□□□ 0.53
BRCC3-202ENST00000340647 RIF1Q5UIP0 2472 aaKnown RBP18.38■□□□□ 0.53
BRCC3-202ENST00000340647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.37■□□□□ 0.53
BRCC3-202ENST00000340647 A0A1B0GVL5 298 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 CLIC2O15247 247 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 VIPR2P41587 438 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 SV2CQ496J9 727 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 SLC44A4Q53GD3 710 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 VITQ6UXI7 678 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 NELFCDQ8IXH7 590 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 CSGALNACT2Q8N6G5 542 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 DTWD2Q8NBA8 298 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 KIAA0895Q8NCT3 520 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 PLEKHO2Q8TD55 490 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 ZNF516Q92618 1163 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 PSMG2Q969U7 264 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 TRPV4Q9HBA0 871 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 SLC39A2Q9NP94 309 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 GDAP2Q9NXN4 497 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 HSFX1Q9UBD0 423 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 DSEQ9UL01 958 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 NME7Q9Y5B8 376 aa18.37■□□□□ 0.53
BRCC3-202ENST00000340647 FAM237AA0A1B0GTK4 181 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms