RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 TMEM130Q8N3G9 435 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 KIF2BQ8N4N8 673 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 SLITRK1Q96PX8 696 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 CGRRF1Q99675 332 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 TEX13BQ9BXU2 312 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 MTMR12Q9C0I1 747 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 SCINQ9Y6U3 715 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 H0YCG3 227 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 LIASO43766 372 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 MMP8P22894 467 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 FOXN2P32314 431 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 ARL2P36404 184 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 MYL6P60660 151 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 MKRN3Q13064 507 aaKnown RBP15.99■□□□□ 0.15
CSDC2-201ENST00000306149 CGB2Q6NT52 195 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 DCUN1D2Q6PH85 259 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 CDHR1Q96JP9 859 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 RMDN2Q96LZ7 410 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 MAFBQ9Y5Q3 323 aaPredicted RBP15.99■□□□□ 0.15
CSDC2-201ENST00000306149 TMEM191CA6NGB0 347 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 TMEM191BP0C7N4 346 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 PECAM1P16284 738 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 NAMPTP43490 491 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 DYNLT1P63172 113 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ENPEPQ07075 957 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 CAPSQ13938 189 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ZNF268Q14587 947 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 TRIM72Q6ZMU5 477 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 SPATA21Q7Z572 469 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 CCHCR1Q8TD31 782 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 SPOCK2Q92563 424 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 TMEM121Q9BTD3 319 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 TRIM33Q9UPN9 1127 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 EXOC1LA0A1B0GW35 172 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 LRRD1A4D1F6 860 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ALADP13716 330 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 NQO1P15559 274 aaKnown RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ZNF280AP59817 542 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 SLFN12LQ6IEE8 588 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 CDR2LQ86X02 465 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 FITM2Q8N6M3 262 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ECT2Q9H8V3 914 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 NKIRAS1Q9NYS0 192 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 IP6K2Q9UHH9 426 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ARL2BPQ9Y2Y0 163 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 SRGAP2CP0DJJ0 459 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 TBXAS1P24557 533 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 GCAP28676 217 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 WDR4P57081 412 aaKnown RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 OSTNP61366 133 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 TGFB2P61812 414 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 GAD2Q05329 585 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 BNIP1Q12981 228 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 SMTNL2Q2TAL5 461 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 RELL1Q8IUW5 271 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ZCCHC9Q8N567 271 aaKnown RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 N4BP2L2Q92802 583 aaPredicted RBP15.98■□□□□ 0.15
CSDC2-201ENST00000306149 VCPIP1Q96JH7 1222 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 CCDC77Q9BR77 488 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
CSDC2-201ENST00000306149 ADGRA2Q96PE1 1338 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 RLFQ13129 1914 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 MARK3P27448 753 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 RXRBP28702 533 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 MGAT5Q09328 741 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 STAT4Q14765 748 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 STXBP2Q15833 593 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 KCNT1Q5JUK3 1230 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 GPAT2Q6NUI2 795 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 DNAJC24Q6P3W2 148 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 TLDC1Q6P9B6 456 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 RCOR2Q8IZ40 523 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 C4orf33Q8N1A6 199 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 BBOF1Q8ND07 529 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 PRPF31Q8WWY3 499 aaKnown RBP15.97■□□□□ 0.15
CSDC2-201ENST00000306149 TFAP2BQ92481 460 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 PCYT2Q99447 389 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 IMPG2Q9BZV3 1241 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 VPS37BQ9H9H4 285 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 PRKAG3Q9UGI9 489 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 ADAMTS5Q9UNA0 930 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 ACTL7BQ9Y614 415 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 LDHAP00338 332 aaKnown RBP15.97■□□□□ 0.15
CSDC2-201ENST00000306149 COPS2P61201 443 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 PKN2Q16513 984 aaKnown RBP15.97■□□□□ 0.15
CSDC2-201ENST00000306149 WDR72Q3MJ13 1102 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 SPOCD1Q6ZMY3 1216 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 ANKMY2Q8IV38 441 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 ANKRD35Q8N283 1001 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 WDTC1Q8N5D0 677 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 MAML1Q92585 1016 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 MAGEB18Q96M61 343 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 AS3MTQ9HBK9 375 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 CISHQ9NSE2 258 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 PIM2Q9P1W9 311 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 CNTN6Q9UQ52 1028 aa15.97■□□□□ 0.15
CSDC2-201ENST00000306149 PARP14Q460N5 1801 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms