RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 RBAKQ9NYW8 714 aaPredicted RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 AKAP7Q9P0M2 348 aaPredicted RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 A0A1W2PQC6 194 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 RBMXL2O75526 392 aaKnown RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 FTLP02792 175 aaPredicted RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 JAK1P23458 1154 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 ADORA2BP29275 332 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 RGS2P41220 211 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 TRIM25Q14258 630 aaKnown RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 ALX1Q15699 326 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 PCSK7Q16549 785 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 GPD1LQ8N335 351 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 OSBPL9Q96SU4 736 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 APOL5Q9BWW9 433 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 PCDHB7Q9Y5E2 793 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 H7C1W4 665 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 MAGOHP61326 146 aaKnown RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 LRRC71Q8N4P6 559 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 APOL1O14791 398 aa12.58□□□□□ -0.39
PCF11-201ENST00000298281 PRIM2P49643 509 aa12.58□□□□□ -0.39
PCF11-201ENST00000298281 MMRN1Q13201 1228 aa12.58□□□□□ -0.39
PCF11-201ENST00000298281 DRAP1Q14919 205 aaPredicted RBP12.58□□□□□ -0.39
PCF11-201ENST00000298281 PEG10Q86TG7 708 aaKnown RBP12.58□□□□□ -0.39
PCF11-201ENST00000298281 PIH1D3Q9NQM4 214 aaKnown RBP12.58□□□□□ -0.39
PCF11-201ENST00000298281 CDC27P30260 824 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 EIF2S3P41091 472 aaKnown RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 HIST2H2ACQ16777 129 aaPredicted RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 HIST2H2AA3Q6FI13 130 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 UVRAGQ9P2Y5 699 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 SIK3Q9Y2K2 1263 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 CCDC189A1A4V9 331 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 EVPLLA8MZ36 301 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 SLC16A4O15374 487 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 STRNO43815 780 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 HIRAP54198 1017 aaPredicted RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 PHACTR4Q8IZ21 702 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 FAM45AQ8TCE6 357 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 SLC9A7Q96T83 725 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 GPR63Q9BZJ6 419 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 YIPF3Q9GZM5 350 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 ZFATQ9P243 1243 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 TRIM64A6NGJ6 449 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 A8MXQ7 604 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 C2CD2LO14523 706 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 MFN2O95140 757 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 GRM4Q14833 912 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 ATAD3BQ5T9A4 648 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 OR8H2Q8N162 312 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 KRT35Q92764 455 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 DHX35Q9H5Z1 703 aaKnown RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 ARHGEF5Q12774 1597 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 SFSWAPQ12872 951 aaKnown RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 SH3RF3Q8TEJ3 882 aaPredicted RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 BHMTQ93088 406 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 MMP19Q99542 508 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
PCF11-201ENST00000298281 ZNF618Q5T7W0 954 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 BNIPLQ7Z465 357 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 P3H2Q8IVL5 708 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 MAGED4Q96JG8 741 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 KLHL11Q9NVR0 708 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 ING3Q9NXR8 418 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 VTI1BQ9UEU0 232 aa12.58□□□□□ -0.4
PCF11-201ENST00000298281 SAMD9Q5K651 1589 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 M0R3G1 203 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 PBLDP30039 288 aaPredicted RBP12.57□□□□□ -0.4
PCF11-201ENST00000298281 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
PCF11-201ENST00000298281 MTFR1Q15390 333 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 P3H1Q32P28 736 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 CCDC137Q6PK04 289 aaKnown RBP12.57□□□□□ -0.4
PCF11-201ENST00000298281 PRR23CQ6ZRP0 262 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 AGAP3Q96P47 875 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 PRPF18Q99633 342 aaKnown RBP12.57□□□□□ -0.4
PCF11-201ENST00000298281 GABBR1Q9UBS5 961 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 AGO2Q9UKV8 859 aaKnown RBP12.57□□□□□ -0.4
PCF11-201ENST00000298281 PRODHO43272 600 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 VCLP18206 1134 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 PRCPP42785 496 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 MCAMP43121 646 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 GPSM2P81274 684 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
PCF11-201ENST00000298281 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 POTEMA6NI47 508 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 NCAM1P13591 858 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 S100GP29377 79 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 IL1RL2Q9HB29 575 aa12.57□□□□□ -0.4
PCF11-201ENST00000298281 BLOC1S6Q9UL45 172 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms