RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 KIF20AO95235 890 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 MYL3P08590 195 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 IFIT2P09913 472 aaKnown RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 ZFP36P26651 326 aaKnown RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 VIPR2P41587 438 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 WNT3P56703 355 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 FAM189BP81408 668 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 PIGFQ07326 219 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 DAG1Q14118 895 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 LONRF1Q17RB8 773 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 B3GNTL1Q67FW5 361 aaPredicted RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 MAPKAPK5Q8IW41 473 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 PARD3BQ8TEW8 1205 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 ZNF483Q8TF39 744 aaPredicted RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 RPS6KC1Q96S38 1066 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 TBCBQ99426 244 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 FNIP2Q9P278 1114 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 KCNE5Q9UJ90 142 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 FPGT-TNNI3KV9GXZ4 949 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 CCDC195A0A1B0GUA6 201 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 A0A1W2PS29 197 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 MBD3L4A6NDZ8 208 aaPredicted RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 MBD3L3A6NE82 208 aaPredicted RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 E7ENX8 843 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 C1QTNF3-AMACRE9PGA6 284 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 M0QYG6 137 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 KPNA5O15131 536 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 PEX14O75381 377 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 SCAF4O95104 1147 aaKnown RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 IL18RAPO95256 599 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 GRPP07492 148 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 SPATA31D3P0C874 917 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 ZKSCAN1P17029 563 aaPredicted RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 NR4A1P22736 598 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 SERPINB3P29508 390 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 MXRA7P84157 204 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 SLC25A3Q00325 362 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 TAP2Q03519 686 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 RAB32Q13637 225 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 MORC3Q14149 939 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 BEAN1Q3B7T3 259 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 C3orf38Q5JPI3 329 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 LMBRD2Q68DH5 695 aaPredicted RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 TAPT1Q6NXT6 567 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 AATKQ6ZMQ8 1374 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 SPATA31D4Q6ZUB0 917 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 TMEM132CQ8N3T6 1108 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 OR2C3Q8N628 320 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 SGCZQ96LD1 299 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 MYD88Q99836 296 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 ZSWIM1Q9BR11 485 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 ZNF768Q9H5H4 540 aaKnown RBP5.48□□□□□ -1.53
CCDC54-201ENST00000261058 NLRC4Q9NPP4 1024 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 STARD7Q9NQZ5 370 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 TMEM74BQ9NUR3 256 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 TRPM5Q9NZQ8 1165 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 HESX1Q9UBX0 185 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 PADI4Q9UM07 663 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 CORO2BQ9UQ03 480 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 CDYLQ9Y232 598 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 NEU2Q9Y3R4 380 aa5.48□□□□□ -1.53
CCDC54-201ENST00000261058 TBC1D4O60343 1298 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 SUN1O94901 812 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 ZFPL1O95159 310 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 PEX11BO96011 259 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 IL1R1P14778 569 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 KCNA2P16389 499 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 UCP3P55916 312 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 RPS16P62249 146 aaKnown RBP5.47□□□□□ -1.53
CCDC54-201ENST00000261058 HSD11B2P80365 405 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 ZNF844Q08AG5 666 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 BIRC2Q13490 618 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 BOP1Q14137 746 aaKnown RBP5.47□□□□□ -1.53
CCDC54-201ENST00000261058 SPATS1Q496A3 300 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 SPDYAQ5MJ70 313 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 MORC1Q86VD1 984 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 GAS2L3Q86XJ1 694 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 DNAJC5GQ8N7S2 189 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 PCSK9Q8NBP7 692 aaKnown RBP5.47□□□□□ -1.53
CCDC54-201ENST00000261058 OR56A3Q8NH54 315 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 DEPTORQ8TB45 409 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 CPT1CQ8TCG5 803 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 EXTL1Q92935 676 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 BOD1Q96IK1 185 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 TRIB1Q96RU8 372 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 MESP1Q9BRJ9 268 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 BRIP1Q9BX63 1249 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 A1CFQ9NQ94 594 aaKnown RBP5.47□□□□□ -1.53
CCDC54-201ENST00000261058 XPR1Q9UBH6 696 aa5.47□□□□□ -1.53
CCDC54-201ENST00000261058 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.47□□□□□ -1.53
CCDC54-201ENST00000261058 A0A1W2PPC4 97 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 POLRMTO00411 1230 aaKnown RBP5.46□□□□□ -1.54
CCDC54-201ENST00000261058 RNASET2O00584 256 aaKnown RBP5.46□□□□□ -1.54
CCDC54-201ENST00000261058 DCLK1O15075 740 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 GPANK1O95872 356 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 KLRC1P26715 233 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 BMPR1AP36894 532 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 BRD3Q15059 726 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 USP39Q53GS9 565 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms