RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ALLCQ8N6M5 410 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 UBR7Q8N806 425 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 MYCBPQ99417 103 aaPredicted RBP16.11■□□□□ 0.17
DDX56-201ENST00000258772 TACO1Q9BSH4 297 aaKnown RBP16.11■□□□□ 0.17
DDX56-201ENST00000258772 RXFP1Q9HBX9 757 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 DRG1Q9Y295 367 aaKnown RBP16.11■□□□□ 0.17
DDX56-201ENST00000258772 F8VP50 259 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 KRT1P04264 644 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 CALB1P05937 261 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 ETS1P14921 441 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 EZRP15311 586 aaKnown RBP16.11■□□□□ 0.17
DDX56-201ENST00000258772 HMGCS2P54868 508 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 IL9RQ01113 521 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 MCL1Q07820 350 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 NR1H3Q13133 447 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 NEDD9Q14511 834 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 LRRC38Q5VT99 294 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 TRABD2AQ86V40 505 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 SLC7A3Q8WY07 619 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 GRAMD1AQ96CP6 724 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 RMDN2Q96LZ7 410 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 AS3MTQ9HBK9 375 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 GEMIN8Q9NWZ8 242 aaKnown RBP16.11■□□□□ 0.17
DDX56-201ENST00000258772 KLHL14Q9P2G3 628 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 MCM8Q9UJA3 840 aa16.11■□□□□ 0.17
DDX56-201ENST00000258772 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.11■□□□□ 0.17
DDX56-201ENST00000258772 TCRBV5S1A1TA0A578 114 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 MGAT5Q09328 741 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 GPS1Q13098 491 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 CCDC142Q17RM4 750 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 SPOCD1Q6ZMY3 1216 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 TDRPQ86YL5 185 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 SCYL3Q8IZE3 742 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 TTC25Q96NG3 672 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 MCEEQ96PE7 176 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 IMPG2Q9BZV3 1241 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 TMEM134Q9H6X4 195 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.1■□□□□ 0.17
DDX56-201ENST00000258772 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
DDX56-201ENST00000258772 DOCK1Q14185 1865 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 ATP2A1O14983 1001 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 ASS1P00966 412 aaKnown RBP16.1■□□□□ 0.17
DDX56-201ENST00000258772 HARSP12081 509 aaKnown RBP16.1■□□□□ 0.17
DDX56-201ENST00000258772 PECAM1P16284 738 aaPredicted RBP16.1■□□□□ 0.17
DDX56-201ENST00000258772 PTPRAP18433 802 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 TGFB2P61812 414 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 OGDHQ02218 1023 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 RNF43Q68DV7 783 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 KLHL29Q96CT2 875 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 TEX13BQ9BXU2 312 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 PITPNM3Q9BZ71 974 aa16.1■□□□□ 0.17
DDX56-201ENST00000258772 IGF2BP3O00425 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX56-201ENST00000258772 ASMTLO95671 621 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 ACVR2BQ13705 512 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 FASTKD3Q14CZ7 662 aaKnown RBP16.09■□□□□ 0.17
DDX56-201ENST00000258772 MORF4L2Q15014 288 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 OASLQ15646 514 aaKnown RBP16.09■□□□□ 0.17
DDX56-201ENST00000258772 TXNRD3NBQ6F5E7 133 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 DNAJC24Q6P3W2 148 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 DCUN1D2Q6PH85 259 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 DENND1AQ8TEH3 1009 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 TBC1D31Q96DN5 1066 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 PAIP2Q9BPZ3 127 aaKnown RBP16.09■□□□□ 0.17
DDX56-201ENST00000258772 NIFKQ9BYG3 293 aaKnown RBP16.09■□□□□ 0.17
DDX56-201ENST00000258772 HACL1Q9UJ83 578 aa16.09■□□□□ 0.17
DDX56-201ENST00000258772 hCG_1818297A0A087WSY0 165 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 POC1B-GALNT4F8VUJ3 575 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 SPAG7O75391 227 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 LSM8O95777 96 aaKnown RBP16.08■□□□□ 0.17
DDX56-201ENST00000258772 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.17
DDX56-201ENST00000258772 VCPP55072 806 aaKnown RBP16.08■□□□□ 0.17
DDX56-201ENST00000258772 WDR72Q3MJ13 1102 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 TFDP3Q5H9I0 405 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 HP1BP3Q5SSJ5 553 aaPredicted RBP16.08■□□□□ 0.17
DDX56-201ENST00000258772 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 GPATCH11Q8N954 259 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 C12orf42Q96LP6 360 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 ARHGEF3Q9NR81 526 aa16.08■□□□□ 0.17
DDX56-201ENST00000258772 LCTP09848 1927 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 ALOX15BO15296 676 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 MAGEB2O15479 319 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 IBSPP21815 317 aaPredicted RBP16.08■□□□□ 0.16
DDX56-201ENST00000258772 ICAM3P32942 547 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 PTPN7P35236 360 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 TNFSF9P41273 254 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 PIGHQ14442 188 aaPredicted RBP16.08■□□□□ 0.16
DDX56-201ENST00000258772 STXBP2Q15833 593 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 RNASEH2BQ5TBB1 312 aaKnown RBP16.08■□□□□ 0.16
DDX56-201ENST00000258772 DCAF15Q66K64 600 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 FAM47EQ6ZV65 393 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 ECHDC2Q86YB7 292 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 BRSK2Q8IWQ3 736 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 TMEM35BQ8NCS4 154 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 PICK1Q9NRD5 415 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.16
DDX56-201ENST00000258772 TTLL13PA6NNM8 815 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms