RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 TP73O15350 636 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 MTMR2Q13614 643 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 CDH18Q13634 790 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 CCDC144BQ3MJ40 725 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 SLFN12LQ6IEE8 588 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 BLOC1S5Q8TDH9 187 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 RNF26Q9BY78 433 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 NSMCE4AQ9NXX6 385 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 EHD2Q9NZN4 543 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 NEDD4P46934 1319 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 TSPAN9O75954 239 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 PADI6Q6TGC4 694 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 AK8Q96MA6 479 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 FAM129AQ9BZQ8 928 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 AGAP1Q9UPQ3 857 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 NOS3P29474 1203 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 PRCPP42785 496 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 SH3TC2Q8TF17 1288 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 CIPCQ9C0C6 399 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 RDM1Q8NG50 284 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 SEMA4DQ92854 862 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 CDK17Q00537 523 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 TAF1CQ15572 869 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 LRRC74BQ6ZQY2 392 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 SETD3Q86TU7 594 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 SCFD2Q8WU76 684 aa17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 ASXL2Q76L83 1435 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 CSF1RP07333 972 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 HMGCS2P54868 508 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 VAMP7P51809 220 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 DDX47Q9H0S4 455 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 CYP4F12Q9HCS2 524 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 FHOD1Q9Y613 1164 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 CCDC151A5D8V7 595 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 TNFAIP2Q03169 654 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 ZNF512BQ96KM6 892 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 KLHL31Q9H511 634 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 DCAF6Q58WW2 860 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 YME1L1Q96TA2 773 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 WWOXQ9NZC7 414 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 TCEA3O75764 348 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 DNAJC3Q13217 504 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 GLMNQ92990 594 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 MRPS26Q9BYN8 205 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 RNF146Q9NTX7 359 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 LEMD3Q9Y2U8 911 aa17.1■□□□□ 0.33
CACNA1A-238ENST00000637276 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 UBE3CQ15386 1083 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 ZSCAN18Q8TBC5 510 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 CALML6Q8TD86 181 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 TPD52L3Q96J77 140 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 GOLPH3LQ9H4A5 285 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 DMPKQ09013 629 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 NAA30Q147X3 362 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 CRLS1Q9UJA2 301 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 SH3D21A4FU49 640 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 LRRC14BA6NHZ5 514 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 MYL4P12829 197 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 LONRF1Q17RB8 773 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 MCEEQ96PE7 176 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 THUMPD3Q9BV44 507 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 KCTD10Q9H3F6 313 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 XPO7Q9UIA9 1087 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 SIK3Q9Y2K2 1263 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 CYP26A1O43174 497 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 GPC5P78333 572 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 FAXCQ5TGI0 409 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 CDHR1Q96JP9 859 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 ADI1Q9BV57 179 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 PSD3Q9NYI0 1048 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 EFR3BQ9Y2G0 817 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 KATNA1O75449 491 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 RALBP11234 206 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 PRELPP51888 382 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 ARF3P61204 181 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 ARF1P84077 181 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 CNOT7Q9UIV1 285 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 NAGPAQ9UK23 515 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 CCDC85CA6NKD9 419 aa17.09■□□□□ 0.33
CACNA1A-238ENST00000637276 PMPCBO75439 489 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms