RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 OVOS1Q6IE37 1185 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 VITQ6UXI7 678 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 SHKBP1Q8TBC3 707 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 ZSCAN18Q8TBC5 510 aaPredicted RBP19.28■□□□□ 0.68
SSBP1-215ENST00000612337 DEPDC1BQ8WUY9 529 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 GPR88Q9GZN0 384 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 CRISPLD1Q9H336 500 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 ST6GALNAC4Q9H4F1 302 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 ZNF334Q9HCZ1 680 aaPredicted RBP19.28■□□□□ 0.68
SSBP1-215ENST00000612337 TRPV5Q9NQA5 729 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 DERAQ9Y315 318 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 CACNA1AO00555 2505 aa19.28■□□□□ 0.68
SSBP1-215ENST00000612337 PIRO00625 290 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 MAN2B1O00754 1011 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 KINO60870 393 aaKnown RBP19.27■□□□□ 0.68
SSBP1-215ENST00000612337 ODC1P11926 461 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 GJA1P17302 382 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 VIPR2P41587 438 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 ID4P47928 161 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 EPHB3P54753 998 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 TMEM132DQ14C87 1099 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 TEAD2Q15562 447 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 CENPPQ6IPU0 288 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 TMC8Q8IU68 726 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 SENP8Q96LD8 212 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 LRRC3Q9BY71 257 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 DNAJC25Q9H1X3 360 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 ASB7Q9H672 318 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 COL4A2P08572 1712 aa19.27■□□□□ 0.68
SSBP1-215ENST00000612337 ANK1P16157 1881 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ANO9A1A5B4 782 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 MTMR11A4FU01 709 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ANKRD63C9JTQ0 380 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 SPTLC1O15269 473 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 NFICP08651 508 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 GDI1P31150 447 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ALDH1A3P47895 512 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 CSTF1Q05048 431 aaKnown RBP19.26■□□□□ 0.67
SSBP1-215ENST00000612337 CUL4AQ13619 759 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ZC2HC1CQ53FD0 456 aaPredicted RBP19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 SLFN12LQ6IEE8 588 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ARMCX5Q6P1M9 558 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 MFSD6LQ8IWD5 586 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ZNF687Q8N1G0 1237 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 KRI1Q8N9T8 703 aaKnown RBP19.26■□□□□ 0.67
SSBP1-215ENST00000612337 E2F7Q96AV8 911 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 EPSTI1Q96J88 318 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 SLITRK6Q9H5Y7 841 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 HSFX1Q9UBD0 423 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 C2CD2Q9Y426 696 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 ASB3Q9Y575 518 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 PCDHGA2Q9Y5H1 932 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 STYXL1Q9Y6J8 313 aa19.26■□□□□ 0.67
SSBP1-215ENST00000612337 TSC2P49815 1807 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
SSBP1-215ENST00000612337 TISP43B9A030 160 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 CYP11A1P05108 521 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 ACOT2P49753 483 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 POU5F1Q01860 360 aaKnown RBP19.25■□□□□ 0.67
SSBP1-215ENST00000612337 SUMF1Q8NBK3 374 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 ATAD1Q8NBU5 361 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 RUBCNQ92622 972 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 AGO2Q9UKV8 859 aaKnown RBP19.25■□□□□ 0.67
SSBP1-215ENST00000612337 SLC27A5Q9Y2P5 690 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 CLIC4Q9Y696 253 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 CEP250Q9BV73 2442 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 SCN1AP35498 2009 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 TICRRQ7Z2Z1 1910 aa19.25■□□□□ 0.67
SSBP1-215ENST00000612337 A0A1W2PRU2 124 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 HEPACAM2A8MVW5 462 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 ZNF263O14978 683 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 PDCP20941 246 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 PTPAQ15257 358 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 USP49Q70CQ1 688 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 ZNF720Q7Z2F6 126 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 ERMP1Q7Z2K6 904 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 ZBTB44Q8NCP5 570 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 OR10T2Q8NGX3 314 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 NELL1Q92832 810 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 PSMG2Q969U7 264 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 HVCN1Q96D96 273 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 TMEM209Q96SK2 561 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 HINFPQ9BQA5 517 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 PRMT8Q9NR22 394 aaPredicted RBP19.24■□□□□ 0.67
SSBP1-215ENST00000612337 ZSCAN32Q9NX65 697 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 STK17AQ9UEE5 414 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 CCDC39Q9UFE4 941 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 DSEQ9UL01 958 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 NDRG2Q9UN36 371 aaKnown RBP19.24■□□□□ 0.67
SSBP1-215ENST00000612337 PIAS3Q9Y6X2 628 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 NCANO14594 1321 aa19.24■□□□□ 0.67
SSBP1-215ENST00000612337 ARNTLO00327 626 aa19.23■□□□□ 0.67
SSBP1-215ENST00000612337 PPP1R37O75864 691 aa19.23■□□□□ 0.67
SSBP1-215ENST00000612337 MLLT6P55198 1093 aaPredicted RBP19.23■□□□□ 0.67
SSBP1-215ENST00000612337 MTAPQ13126 283 aa19.23■□□□□ 0.67
SSBP1-215ENST00000612337 MAMSTRQ6ZN01 415 aa19.23■□□□□ 0.67
SSBP1-215ENST00000612337 DYMQ7RTS9 669 aa19.23■□□□□ 0.67
SSBP1-215ENST00000612337 DNAJB7Q7Z6W7 309 aaPredicted RBP19.23■□□□□ 0.67
SSBP1-215ENST00000612337 SFR1Q86XK3 245 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms