RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CGRRF1Q99675 332 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 DHX33Q9H6R0 707 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF302Q9NR11 478 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 HACL1Q9UJ83 578 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 CNTN6Q9UQ52 1028 aa21.42■■□□□ 1.02
SHKBP1-225ENST00000600733 LIASO43766 372 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 SUN1O94901 812 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 OATP04181 439 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 TBXAS1P24557 533 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 ABCD1P33897 745 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 NAMPTP43490 491 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF252P-AS1Q0IIN9 211 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 SLFN12LQ6IEE8 588 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 MFSD7Q6UXD7 560 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 RELL1Q8IUW5 271 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 ZCCHC9Q8N567 271 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 SLITRK1Q96PX8 696 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 EURLQ9NYK6 297 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 DOCK1Q14185 1865 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 TTLL13PA6NNM8 815 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 PIGRP01833 764 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 MMP8P22894 467 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF280AP59817 542 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 STAT4Q14765 748 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 TMED2Q15363 201 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 TXNRD3NBQ6F5E7 133 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 SPATA21Q7Z572 469 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 SCYL3Q8IZE3 742 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 JDP2Q8WYK2 163 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 SAYSD1Q9NPB0 183 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 IP6K2Q9UHH9 426 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF148Q9UQR1 794 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 MAFBQ9Y5Q3 323 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 IVNS1ABPQ9Y6Y0 642 aa21.41■■□□□ 1.02
SHKBP1-225ENST00000600733 RASA4BC9J798 803 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 F8VP50 259 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 RASA4O43374 803 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 ATP6V1G2O95670 118 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 CST3P01034 146 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 KRT1P04264 644 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 PTPRAP18433 802 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 ARL2P36404 184 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 PNMA8AQ86V59 439 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 SLC7A3Q8WY07 619 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 HAUS1Q96CS2 278 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 MCEEQ96PE7 176 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 WRNIP1Q96S55 665 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 CCDC77Q9BR77 488 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 ACAD9Q9H845 621 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 ADGRA2Q96PE1 1338 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 TMEM191CA6NGB0 347 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 TMEM191BP0C7N4 346 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 TNFSF9P41273 254 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 OAZ1P54368 228 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 FASTKD3Q14CZ7 662 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF394Q53GI3 561 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 CGB2Q6NT52 195 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 TEX13BQ9BXU2 312 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 NKIRAS1Q9NYS0 192 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 BAIAP2L1Q9UHR4 511 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 ADAMTS5Q9UNA0 930 aa21.4■■□□□ 1.02
SHKBP1-225ENST00000600733 SIP14410 1827 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 HGSO14964 777 aaPredicted RBP21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 LDHAP00338 332 aaKnown RBP21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 ARSEP51690 589 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 ZNF132P52740 706 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 NCALDP61601 193 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 KCNJ2P63252 427 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 OGDHQ02218 1023 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 E2F5Q15329 346 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 PREPLQ4J6C6 727 aaPredicted RBP21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 ARHGEF18Q6ZSZ5 1173 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 RCOR2Q8IZ40 523 aa21.39■■□□□ 1.02
SHKBP1-225ENST00000600733 BRD2P25440 801 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 GCAP28676 217 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 GALNTL6Q49A17 601 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 MAML1Q92585 1016 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 RMDN2Q96LZ7 410 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 MAGEB18Q96M61 343 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 ECT2Q9H8V3 914 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 PICK1Q9NRD5 415 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 KCNG1Q9UIX4 513 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 ARL2BPQ9Y2Y0 163 aa21.39■■□□□ 1.01
SHKBP1-225ENST00000600733 LCTP09848 1927 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 EXOC1LA0A1B0GW35 172 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 DNALI1O14645 258 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 PECAM1P16284 738 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 FOXN2P32314 431 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 CETN2P41208 172 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 GPS1Q13098 491 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 CAPN12Q6ZSI9 719 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 MICALL2Q8IY33 904 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 FITM2Q8N6M3 262 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 RBM41Q96IZ5 413 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 YY1AP1Q9H869 796 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 NOD2Q9HC29 1040 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 SPAG7O75391 227 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 TJP3O95049 919 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms